RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SLC7A5Q01650 507 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 RELAQ04206 551 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 OCA2Q04671 838 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 NFATC3Q12968 1075 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 CBLBQ13191 982 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 KCNAB2Q13303 367 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 NAB1Q13506 487 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 USP10Q14694 798 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 SSPNQ14714 243 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FASTKD3Q14CZ7 662 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 NCF4Q15080 339 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 NDUFA9Q16795 377 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 UGT8Q16880 541 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 DEFB109BQ30KR1 87 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PTCHD3Q3KNS1 767 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 CCSMST1Q4G0I0 132 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 WASHC2DQ5SRD0 308 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 RBM20Q5T481 1227 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 GRTP1Q5TC63 336 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 C1orf189Q5VU69 101 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 GARNL3Q5VVW2 1013 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PRAMEF13Q5VWM6 474 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 MLIPQ5VWP3 458 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PRMT9Q6P2P2 845 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 AGTRAPQ6RW13 159 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 CYHR1Q6ZMK1 362 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 RAPH1Q70E73 1250 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 MED25Q71SY5 747 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ADAMTSL2Q86TH1 951 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 C17orf64Q86WR6 236 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 RAB43Q86YS6 212 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FAM20CQ8IXL6 584 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 CSNK1A1LQ8N752 337 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ENDOVQ8N8Q3 282 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 TMEM102Q8N9M5 508 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 CLEC1AQ8NC01 280 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PPFIBP2Q8ND30 876 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 C9orf43Q8TAL5 461 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 ZNF480Q8WV37 535 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 IFT81Q8WYA0 676 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 COL26A1Q96A83 441 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FKBP10Q96AY3 582 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ALKBH8Q96BT7 664 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 PTERQ96BW5 349 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 RNF31Q96EP0 1072 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 MVB12AQ96EY5 273 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PDLIM5Q96HC4 596 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 CABS1Q96KC9 395 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FER1L6-AS2Q96M78 137 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 BBC3Q96PG8 261 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 FMO2Q99518 471 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 EGFL8Q99944 293 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PLCD4Q9BRC7 762 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 WDR83Q9BRX9 315 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 HAUS8Q9BT25 410 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 LRRC1Q9BTT6 524 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 SPRTNQ9H040 489 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 ATG10Q9H0Y0 220 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ING2Q9H160 280 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 SLC25A18Q9H1K4 315 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 CNOT10Q9H9A5 744 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 POPDC3Q9HBV1 291 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 SLC24A3Q9HC58 644 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ACSS2Q9NR19 701 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 TMEM184CQ9NVA4 438 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 GEMIN8Q9NWZ8 242 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 GRHL1Q9NZI5 618 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 STOX2Q9P2F5 926 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 DHCR7Q9UBM7 475 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 ZNF282Q9UDV7 671 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 TLK1Q9UKI8 766 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 NXT1Q9UKK6 140 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 CDC14AQ9UNH5 594 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 NOVA2Q9UNW9 492 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 PDE10AQ9Y233 779 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 KLHL20Q9Y2M5 609 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 MRPS18BQ9Y676 258 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 KCNE2Q9Y6J6 123 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 IKBKGQ9Y6K9 419 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 MGAQ8IWI9 3026 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 COL27A1Q8IZC6 1860 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 SMG1Q96Q15 3661 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 ITPR1Q14643 2758 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 ESYT3A0FGR9 886 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 KRT87PA6NCN2 255 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 URADA6NGE7 173 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 B8ZZF3 427 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 H0YGG7 62 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 H3BMH7 237 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 H7BY64 318 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 TERTO14746 1132 aaKnown RBP4.18□□□□□ -1.74
SNX1-205ENST00000559339 DSCR3O14972 297 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 GPR37O15354 613 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 CTSVO60911 334 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 RFPL1O75677 317 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 S100BP04271 92 aaPredicted RBP4.18□□□□□ -1.74
SNX1-205ENST00000559339 PRB1P04280 392 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 ALPPP05187 535 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 SLC35G6P0C7Q6 338 aa4.18□□□□□ -1.74
SNX1-205ENST00000559339 WT1P19544 449 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms