RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 SBK3P0C264 359 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 HSPA8P11142 646 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 MBL2P11226 248 aaPredicted RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 FUT4P22083 530 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.28
MARK3-212ENST00000558223 PIK3R1P27986 724 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 CDC25CP30307 473 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 CPOXP36551 454 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 ACVRL1P37023 503 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 PSMD8P48556 350 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 PTDSS1P48651 473 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 MRPL19P49406 292 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 KCNQ1P51787 676 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 PLK1P53350 603 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 MTTPP55157 894 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 UCP3P55916 312 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 MAXP61244 160 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 HERVK_113P63132 956 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 EIF2B5Q13144 721 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 ARHGEF7Q14155 803 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 KPNB1Q14974 876 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 CYP27C1Q4G0S4 372 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 ACSBG2Q5FVE4 666 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 COQ5Q5HYK3 327 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 PLEKHS1Q5SXH7 462 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 IRAK1BP1Q5VVH5 260 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 GARNL3Q5VVW2 1013 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 CES4AQ5XG92 561 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 ANKS6Q68DC2 871 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 PRMT9Q6P2P2 845 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 HACD2Q6Y1H2 254 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 GLT6D1Q7Z4J2 308 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 ISCA2Q86U28 154 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 SAMD14Q8IZD0 417 aaPredicted RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 PGBD5Q8N414 524 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 KDM1BQ8NB78 822 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 LEMD2Q8NC56 503 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 KCNJ9Q92806 393 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 POP5Q969H6 163 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 VPS33AQ96AX1 596 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 ZNF689Q96CS4 500 aaPredicted RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 PDLIM5Q96HC4 596 aaKnown RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 MAP6Q96JE9 813 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 NR1H4Q96RI1 486 aaPredicted RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 CLSTN3Q9BQT9 956 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 SLC25A23Q9BV35 468 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 C1QTNF3Q9BXJ4 246 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 ERVK-6Q9BXR3 956 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 POMKQ9H5K3 350 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 COPS7BQ9H9Q2 264 aaPredicted RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 ZSCAN32Q9NX65 697 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 DCAF16Q9NXF7 216 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 IL1RAPL1Q9NZN1 696 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 C6orf203Q9P0P8 240 aaPredicted RBP7.03□□□□□ -1.28
MARK3-212ENST00000558223 CFAP97Q9P2B7 532 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 SLC2A6Q9UGQ3 507 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 SLC7A8Q9UHI5 535 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 SH3BP1Q9Y3L3 701 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 L3MBTL1Q9Y468 752 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 RAI2Q9Y5P3 530 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 FRMPD3Q5JV73 1810 aa7.03□□□□□ -1.28
MARK3-212ENST00000558223 LOC102723971A0A1B0GUV8 181 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 A0A1W2PQ09 198 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 CCDC162PA2VCL2 907 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 A8MT66 165 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 FADS2P1A8MWK0 482 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 GOLGA8TH3BQL2 631 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 PEX12O00623 359 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 UBDO15205 165 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 ADAM20O43506 726 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 PEX1O43933 1283 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 ENTPD5O75356 428 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 SRP72O76094 671 aaKnown RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 RHOBTB1O94844 696 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 ALX3O95076 343 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 TOP3BO95985 862 aaKnown RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 VIPP01282 170 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 LRG1P02750 347 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 PKMP14618 531 aaKnown RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 CD1DP15813 335 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 ZNF37AP17032 561 aaPredicted RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 ZNF7P17097 686 aaPredicted RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 RPS3P23396 243 aaKnown RBP eCLIP7.02□□□□□ -1.29
MARK3-212ENST00000558223 SP100P23497 879 aaPredicted RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 HMGCLP35914 325 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 RGS4P49798 205 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 ZNF140P52738 457 aaPredicted RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 SLC7A9P82251 487 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 CACNG1Q06432 222 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 SULT2A1Q06520 285 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 TBL3Q12788 808 aaKnown RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 TRAP1Q12931 704 aaKnown RBP7.02□□□□□ -1.29
MARK3-212ENST00000558223 CUL3Q13618 768 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 CDH18Q13634 790 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 DMC1Q14565 340 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 PPA1Q15181 289 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 RCN1Q15293 331 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 CYTH1Q15438 398 aa7.02□□□□□ -1.29
MARK3-212ENST00000558223 LSM12Q3MHD2 195 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms