RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PAQR3Q6TCH7 311 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 KIAA0408Q6ZU52 694 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 TTLL10Q6ZVT0 673 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 UBE2R2Q712K3 238 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 COX15Q7KZN9 410 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 RNF44Q7L0R7 432 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PAQR7Q86WK9 346 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 OR4N4Q8N0Y3 316 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 DTWD1Q8N5C7 304 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PPFIBP2Q8ND30 876 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 OR2Y1Q8NGV0 311 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 EEF1AKMT1Q8WVE0 214 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 LRRC39Q96DD0 335 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 CFAP36Q96G28 342 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 SNF8Q96H20 258 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 C17orf62Q9BQA9 187 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PLCD4Q9BRC7 762 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 TRIM31Q9BZY9 425 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 TRIM4Q9C037 500 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 MLXIPLQ9NP71 852 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 MRPS30Q9NP92 439 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 CUTCQ9NTM9 273 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 TAS2R13Q9NYV9 303 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 IFT80Q9P2H3 777 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 GPN3Q9UHW5 284 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 TRMT6Q9UJA5 497 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 CHMP2BQ9UQN3 213 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PADI2Q9Y2J8 665 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 SNX24Q9Y343 169 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PTRH2Q9Y3E5 179 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 SCN2AQ99250 2005 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 DOPEY2Q9Y3R5 2298 aa8.4□□□□□ -1.07
SNRPA1-206ENST00000558059 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 A0A1B0GX78 115 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 HYKKA2RU49 373 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ZNF839A8K0R7 811 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 E7ESA3 106 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 H0YGG7 62 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 TSPAN12O95859 305 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 SYF2O95926 243 aaKnown RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 UMODP07911 640 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 CD63P08962 238 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 IMPA1P29218 277 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 OTX2P32243 289 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 CASRP41180 1078 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 OR1D4P47884 311 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PGGT1BP53609 377 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ARL4CP56559 192 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ARF3P61204 181 aaPredicted RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ETF1P62495 437 aaKnown RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 TSTA3Q13630 321 aaPredicted RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ATP1A4Q13733 1029 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 FASTKD3Q14CZ7 662 aaKnown RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PRTGQ2VWP7 1150 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 FAM214AQ32MH5 1076 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 COLEC12Q5KU26 742 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 HECTD2Q5U5R9 776 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ICE2Q659A1 982 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 UGT3A1Q6NUS8 523 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ASB18Q6ZVZ8 466 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 OVCH1Q7RTY7 1134 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 MRGPREQ86SM8 312 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 RAB43Q86YS6 212 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 TTC29Q8NA56 475 aaPredicted RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 SPATA4Q8NEY3 305 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 GABPB2Q8TAK5 448 aaPredicted RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PTERQ96BW5 349 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ZFYVE21Q9BQ24 234 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 EPN3Q9H201 632 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PPANQ9NQ55 473 aaKnown RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ACSS2Q9NR19 701 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 STOX2Q9P2F5 926 aaPredicted RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ANKMY1Q9P2S6 941 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 NDOR1Q9UHB4 597 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 TAC3Q9UHF0 121 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ANAPC2Q9UJX6 822 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ADAMTS6Q9UKP5 1117 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PDE10AQ9Y233 779 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 VWA7Q9Y334 891 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PCDHGA9Q9Y5G4 932 aaKnown RBP8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 ESPL1Q14674 2120 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 LRRK2Q5S007 2527 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 PTPN13Q12923 2485 aa8.39□□□□□ -1.07
SNRPA1-206ENST00000558059 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 VSTM2BA6NLU5 285 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 SLC16A5O15375 505 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 RAD51CO43502 376 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 CCNDBP1O95273 360 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 WISP1O95388 367 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 ALBP02768 609 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 EIF2S1P05198 315 aaKnown RBP8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 C8GP07360 202 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 FDXRP22570 491 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 FOLR3P41439 243 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 RGS4P49798 205 aa8.38□□□□□ -1.07
SNRPA1-206ENST00000558059 ABATP80404 500 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms