RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 METRNLQ641Q3 311 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 KLHDC8AQ8IYD2 350 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 LRRC56Q8IYG6 542 aaPredicted RBP17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 SLC44A3Q8N4M1 653 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 GPR156Q8NFN8 814 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 RPLP0P6Q8NHW5 317 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 CANT1Q8WVQ1 401 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 RIMS3Q9UJD0 308 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 PPT2Q9UMR5 302 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 WDR37Q9Y2I8 494 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 AK5Q9Y6K8 562 aa17.7■□□□□ 0.42
SDR39U1-220ENST00000556548 TCRBV3S1A0A5B6 114 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 H0YIV9 168 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 ARPC2O15144 300 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 IGFALSP35858 605 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 CLDN8P56748 225 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 GTDC1Q4AE62 458 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 TMEM259Q4ZIN3 620 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 KIAA1324Q6UXG2 1013 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 GLB1L3Q8NCI6 653 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 OR2T34Q8NGX1 318 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 LRTOMTQ8WZ04 291 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 MAGEB10Q96LZ2 347 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 SGPP1Q9BX95 441 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 SPNS1Q9H2V7 528 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 CCDC177Q9NQR7 707 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 AURKCQ9UQB9 309 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 CA5BQ9Y2D0 317 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 PCDHGA11Q9Y5H2 935 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 NARSO43776 548 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 COQ9O75208 318 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 IL6P05231 212 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 PRPS2P11908 318 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 PRPH2P23942 346 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 RPS13P62277 151 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 CSTF3Q12996 717 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 AGERQ15109 404 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 ZNF740Q8NDX6 193 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 RAD51AP1Q96B01 352 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 SLC6A13Q9NSD5 602 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 SPATA6Q9NWH7 488 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 CHCHD3Q9NX63 227 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 NEUROG3Q9Y4Z2 214 aa17.69■□□□□ 0.42
SDR39U1-220ENST00000556548 SAP18O00422 153 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 GSNP06396 782 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 CCR3P51677 355 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 CLDN2P57739 230 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 OR4D2P58180 307 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 TFF2Q03403 129 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 RPA4Q13156 261 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 TMEM92Q6UXU6 159 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 UNC5DQ6UXZ4 953 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 HORMAD1Q86X24 394 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 PDSS2Q86YH6 399 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 SYT12Q8IV01 421 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 FLCNQ8NFG4 579 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 UHRF1Q96T88 793 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 ITM2CQ9NQX7 267 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 GPSM3Q9Y4H4 160 aa17.68■□□□□ 0.42
SDR39U1-220ENST00000556548 KANSL1LA0AUZ9 987 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 CASQ2O14958 399 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 SLC35G4P0C7Q5 338 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 MYCLP1P12525 358 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 MAPK1P28482 360 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 S100A3P33764 101 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 ACSM2AQ08AH3 577 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 BNIP2Q12982 314 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 ACSM2BQ68CK6 577 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 ANKRD26P1Q6NSI1 321 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 KIAA1161Q6NSJ0 714 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 MED27Q6P2C8 311 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 TRIM73Q86UV7 250 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 DCUN1D3Q8IWE4 304 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 OXR1Q8N573 874 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 C1orf52Q8N6N3 182 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 B4GALNT2Q8NHY0 566 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 SLC5A11Q8WWX8 675 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 MRGPRX1Q96LB2 322 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 INPP5KQ9BT40 448 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 THUMPD3Q9BV44 507 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 IKZF5Q9H5V7 419 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 GPRC5BQ9NZH0 403 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 TMED5Q9Y3A6 229 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 SNX13Q9Y5W8 968 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 V9GYQ6 96 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 TIPRLO75663 272 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 NPPAP01160 153 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 CEACAM5P06731 702 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 C1GALT1C1LP0DN25 315 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 ACADMP11310 421 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 CDH1P12830 882 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 DRD1P21728 446 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 KELP23276 732 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 CCDC85BQ15834 202 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 OGFRL1Q5TC84 451 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 AMIGO2Q86SJ2 522 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 OR7A2PQ8NGA2 310 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 OR5K2Q8NHB8 316 aa17.67■□□□□ 0.42
SDR39U1-220ENST00000556548 PPWD1Q96BP3 646 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms