RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 XKR6Q5GH73 641 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 KIAA0930Q6ICG6 404 aaPredicted RBP4.37□□□□□ -1.71
PRPF39-209ENST00000556353 SPINK14Q6IE38 97 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 PSRC1Q6PGN9 363 aaPredicted RBP4.37□□□□□ -1.71
PRPF39-209ENST00000556353 CLEC17AQ6ZS10 378 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 MOB2Q70IA6 237 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 SCYL3Q8IZE3 742 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 CPSF7Q8N684 471 aaKnown RBP4.37□□□□□ -1.71
PRPF39-209ENST00000556353 PI4KAP1Q8N8J0 262 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 BMPERQ8N8U9 685 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 CCDC191Q8NCU4 936 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 FAM81BQ96LP2 452 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 PAG1Q9NWQ8 432 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 MED23Q9ULK4 1368 aa4.37□□□□□ -1.71
PRPF39-209ENST00000556353 PRSS51A0A1B0GVH4 220 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 TRIM49P0CI25 452 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 TRIM49CP0CI26 452 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 EFNA1P20827 205 aaPredicted RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 PON1P27169 355 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 MAGEA11P43364 429 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 HUNKP57058 714 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 POU5F1Q01860 360 aaKnown RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 MAP2K1Q02750 393 aaPredicted RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 TNIP1Q15025 636 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 CTU2Q2VPK5 515 aaKnown RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 IKBIPQ70UQ0 350 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 PCGF5Q86SE9 256 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 P2RY8Q86VZ1 359 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 EGFL6Q8IUX8 553 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 LSMEM2Q8N112 164 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 OR2T11Q8NH01 316 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 UCMAQ8WVF2 138 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 ZNRF4Q8WWF5 429 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 HPSE2Q8WWQ2 592 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 PGAM5Q96HS1 289 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 SLC7A10Q9NS82 523 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 CWC25Q9NXE8 425 aaPredicted RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 FBXL17Q9UF56 701 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 CHD9Q3L8U1 2897 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 TDRD15B5MCY1 1934 aaKnown RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 PCNX3Q9H6A9 2034 aa4.36□□□□□ -1.71
PRPF39-209ENST00000556353 COL1A1P02452 1464 aaPredicted RBP4.36□□□□□ -1.71
PRPF39-209ENST00000556353 DOCK1Q14185 1865 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 B4E171 279 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 E9PI62 339 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 PRKRAO75569 313 aaKnown RBP4.35□□□□□ -1.71
PRPF39-209ENST00000556353 RSL1D1O76021 490 aaKnown RBP4.35□□□□□ -1.71
PRPF39-209ENST00000556353 MOCS3O95396 460 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 GABRB1P18505 474 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 BDNFP23560 247 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 RPS12P25398 132 aaKnown RBP4.35□□□□□ -1.71
PRPF39-209ENST00000556353 TSPAN7P41732 249 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 CDH8P55286 799 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 SLC8A3P57103 927 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 PRKCZQ05513 592 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 CALD1Q05682 793 aaKnown RBP4.35□□□□□ -1.71
PRPF39-209ENST00000556353 SGSM1Q2NKQ1 1148 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 CCDC152Q4G0S7 254 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 JAKMIP3Q5VZ66 844 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 LINGO4Q6UY18 593 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 MCEMP1Q8IX19 187 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 RAB42Q8N4Z0 105 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 CERS5Q8N5B7 392 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 PPFIBP2Q8ND30 876 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 KBTBD8Q8NFY9 601 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 ZBED3Q96IU2 234 aaPredicted RBP4.35□□□□□ -1.71
PRPF39-209ENST00000556353 LAT2Q9GZY6 243 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 MYOZ2Q9NPC6 264 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 CHD7Q9P2D1 2997 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 LYVE1Q9Y5Y7 322 aa4.35□□□□□ -1.71
PRPF39-209ENST00000556353 TTC28Q96AY4 2481 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 TRANK1O15050 2925 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 A0A1W2PN81 502 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 KLF11O14901 512 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 OR2C1O95371 312 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 RB1P06400 928 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 MAN1A1P33908 653 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 CHRNA7P36544 502 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
PRPF39-209ENST00000556353 IRX3P78415 501 aaPredicted RBP4.34□□□□□ -1.71
PRPF39-209ENST00000556353 MPP1Q00013 466 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 MAMLD1Q13495 774 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 KCNC3Q14003 757 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 GCKRQ14397 625 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 UGP2Q16851 508 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 TWISTNBQ3B726 338 aaPredicted RBP4.34□□□□□ -1.71
PRPF39-209ENST00000556353 CCDC30Q5VVM6 783 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 DOK6Q6PKX4 331 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 CHST9Q7L1S5 443 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 SCFD2Q8WU76 684 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 RPS10P5Q9NQ39 176 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 RNF186Q9NXI6 227 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 TAS2R14Q9NYV8 317 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 AASSQ9UDR5 926 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 EXO1Q9UQ84 846 aaKnown RBP4.34□□□□□ -1.71
PRPF39-209ENST00000556353 MAST2Q6P0Q8 1798 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 FRMPD3Q5JV73 1810 aa4.34□□□□□ -1.71
PRPF39-209ENST00000556353 NCOR1O75376 2440 aa4.33□□□□□ -1.72
PRPF39-209ENST00000556353 PLXNB2O15031 1838 aa4.33□□□□□ -1.72
PRPF39-209ENST00000556353 LOC285556D6RIA3 1793 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms