RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 KLC1Q07866 573 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 MFAP5Q13361 173 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 MRPL49Q13405 166 aaKnown RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 RAPSNQ13702 412 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 DSG2Q14126 1118 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 KCNJ11Q14654 390 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF169Q14929 603 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 NR6A1Q15406 480 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 INAQ16352 499 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 NDUFA9Q16795 377 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 KLHL38Q2WGJ6 581 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 FRMPD2BQ6IN97 320 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 UGT3A1Q6NUS8 523 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 CYHR1Q6ZMK1 362 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 MAMDC2Q7Z304 686 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 PCGF5Q86SE9 256 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 CAND1Q86VP6 1230 aaKnown RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 KCNMB4Q86W47 210 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 PAQR7Q86WK9 346 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 PARP9Q8IXQ6 854 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 KBTBD2Q8IY47 623 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 OR4N4Q8N0Y3 316 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 SLC34A3Q8N130 599 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 RASGEF1CQ8N431 466 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 PRELID2Q8N945 189 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 GABPB2Q8TAK5 448 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 ASB11Q8WXH4 323 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 INPP5DQ92835 1189 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 THAP11Q96EK4 314 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 C19orf60Q96EN9 201 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 PBKQ96KB5 322 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 NAP1L3Q99457 506 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 MIPEPQ99797 713 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 TRIM56Q9BRZ2 755 aaKnown RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 DPH7Q9BTV6 452 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 CRB3Q9BUF7 120 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 RNF32Q9H0A6 362 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 CCDC68Q9H2F9 335 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 ZBTB20Q9HC78 741 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 MKKSQ9NPJ1 570 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 TMEM184CQ9NVA4 438 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 C14orf105Q9NVL8 296 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 SYBUQ9NX95 663 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 SAMD15Q9P1V8 674 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 ERRFI1Q9UJM3 462 aaPredicted RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 NOVA2Q9UNW9 492 aaKnown RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 CRYL1Q9Y2S2 319 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 JRKLQ9Y4A0 524 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 MDC1Q14676 2089 aaKnown RBP7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 DOCK10Q96BY6 2186 aa7.42□□□□□ -1.22
PTCSC3-201ENST00000556013 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 TRAV17A0A0B4J275 112 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ZCWPW2A0A1B0GU75 182 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 A0A1B0GUH1 482 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 DYTNA2CJ06 578 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ARHGEF33A8MVX0 844 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 H0YIG0 161 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 MAP2K7O14733 419 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 NIPSNAP2O75323 286 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 BMP10O95393 424 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 KRT14P02533 472 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 SERPINA7P05543 415 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ERVK-10P10266 1014 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 IL10P22301 178 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 RPA3P35244 121 aaPredicted RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 BDKRB1P46663 353 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 PER3P56645 1201 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 THOC5Q13769 683 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 DHX34Q14147 1143 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 FASTKQ14296 549 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 CYP1B1Q16678 543 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 CCSMST1Q4G0I0 132 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 PRR30Q53SZ7 412 aaPredicted RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ACSBG2Q5FVE4 666 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 VWA2Q5GFL6 755 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ICE2Q659A1 982 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 CNSTQ6PJW8 725 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 TMEM205Q6UW68 189 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 TAX1BP1Q86VP1 789 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 LRRC8AQ8IWT6 810 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 REXO1L1PQ8IX06 675 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 LRRC56Q8IYG6 542 aaPredicted RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ARHGEF39Q8N4T4 335 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 OTUD6BQ8N6M0 293 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 DNAJB8Q8NHS0 232 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 MCOLN3Q8TDD5 553 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF480Q8WV37 535 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 PSMF1Q92530 271 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 RERGQ96A58 199 aaPredicted RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 MAGOHBQ96A72 148 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 THOC3Q96J01 351 aaKnown RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 CABS1Q96KC9 395 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 C10orf90Q96M02 699 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 PKP4Q99569 1192 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 SOX17Q9H6I2 414 aaPredicted RBP7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 RIC8BQ9NVN3 520 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 LUZP4Q9P127 313 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms