RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 METTL6Q8TCB7 284 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 JPH3Q8WXH2 748 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NCSTNQ92542 709 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NEIL2Q969S2 332 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 RERGQ96A58 199 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NSUN5Q96P11 429 aaKnown RBP10.8□□□□□ -0.68
SHMT2-220ENST00000555634 MENTQ9BUN1 341 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NTMT1Q9BV86 223 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NLNQ9BYT8 704 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 FANCEQ9HB96 536 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 FGFR1OP2Q9NVK5 253 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 RIC8BQ9NVN3 520 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 NMRK1Q9NWW6 199 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 SOHLH2Q9NX45 425 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 EPHA6Q9UF33 1036 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 ADGRE2Q9UHX3 823 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 POMT2Q9UKY4 750 aa10.8□□□□□ -0.68
SHMT2-220ENST00000555634 EME2A4GXA9 379 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 ANKDD1BA6NHY2 528 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 LRRC14BA6NHZ5 514 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 PPM1DO15297 605 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 VPS4BO75351 444 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 LYPLA1O75608 230 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 CPNE6O95741 557 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 CHRNGP07510 517 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 C1GALT1C1LP0DN25 315 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 KITP10721 976 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 PCNAP12004 261 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 JUPP14923 745 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 TSPAN8P19075 237 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 MPSTP25325 297 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 PSMB5P28074 263 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 MLLT3P42568 568 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 RPS15AP62244 130 aaKnown RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 OCRLQ01968 901 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 SPIDRQ14159 915 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 SLBPQ14493 270 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 AMZ1Q400G9 498 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 TMTC4Q5T4D3 741 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 GUSBP11Q6P575 273 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 WDR74Q6RFH5 385 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 NXPE4Q6UWF7 544 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 ACAD11Q709F0 780 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 CLYBLQ8N0X4 340 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 ZNF781Q8N8C0 355 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 CDYL2Q8N8U2 506 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 ANKS4BQ8N8V4 417 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 OR4F6Q8NGB9 312 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 OR52B6Q8NGF0 335 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 RSC1A1Q92681 617 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 SEC16BQ96JE7 1060 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 TGM7Q96PF1 710 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 GFM1Q96RP9 751 aaKnown RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 CCDC3Q9BQI4 270 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 SHCBP1LQ9BZQ2 653 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 RAB33BQ9H082 229 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 EPN3Q9H201 632 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 TMEM184CQ9NVA4 438 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 AKAP7Q9P0M2 348 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 MARCOQ9UEW3 520 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 MDC1Q14676 2089 aaKnown RBP10.79□□□□□ -0.68
SHMT2-220ENST00000555634 ADAMTS20P59510 1910 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 MUC6Q6W4X9 2439 aa10.79□□□□□ -0.68
SHMT2-220ENST00000555634 IGHV1OR21-1A0A087WYE8 117 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 PRAMEF33A0A0G2JMD5 474 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 BTN3A3O00478 584 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 OR7A17O14581 309 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 HDAC3O15379 428 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 CAPN5O15484 640 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 RGS14O43566 566 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 SHOX2O60902 331 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 ULK1O75385 1050 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 OR4F21O95013 312 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 TGDSO95455 350 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 RPLP0P05388 317 aaKnown RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 CAPN1P07384 714 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 SLC35G6P0C7Q6 338 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 GIMD1P0DJR0 217 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 CDK4P11802 303 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 NPPBP16860 134 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 TRAF3Q13114 568 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 ILKQ13418 452 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 PDCD2Q16342 344 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 CPSF6Q16630 551 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 ZC3H12BQ5HYM0 836 aaKnown RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 KANK2Q63ZY3 851 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 TMIGD1Q6UXZ0 262 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 SYVN1Q86TM6 617 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 KMT5CQ86Y97 462 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 LRRC56Q8IYG6 542 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 L3MBTL4Q8NA19 623 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 OR2A1Q8NGT9 310 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 OR6Y1Q8NGX8 325 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 TWIST2Q8WVJ9 160 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 ZUFSPQ96AP4 578 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 OR4K3Q96R72 315 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms