RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 SLC40A1Q9NP59 571 aa9.32□□□□□ -0.92
HNRNPC-220ENST00000555585 FARSBQ9NSD9 589 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-220ENST00000555585 GIMAP2Q9UG22 337 aa9.32□□□□□ -0.92
HNRNPC-220ENST00000555585 PCDHB11Q9Y5F2 797 aa9.32□□□□□ -0.92
HNRNPC-220ENST00000555585 SPAG17Q6Q759 2223 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 PIPSLA2A3N6 862 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 OR6C74A6NCV1 312 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 LMO7DNF2Z398 122 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 UBDO15205 165 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 UBOX5O94941 541 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CCNDBP1O95273 360 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CHRM5P08912 532 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 LBPP18428 481 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CD22P20273 847 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CMPK1P30085 196 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CASP2P42575 452 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 DPP6P42658 865 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ARRB1P49407 418 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 PPM1FP49593 454 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 NEK2P51955 445 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 MAZP56270 477 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 BNC1Q01954 994 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 MEF2AQ02078 507 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 HHEXQ03014 270 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 PCDH1Q08174 1060 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 DDX39BQ13838 428 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 UBAP2LQ14157 1087 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 NR6A1Q15406 480 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 SF1Q15637 639 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 TBCCQ15814 346 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 LPAL2Q16609 132 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 DUOXA1Q1HG43 343 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 GALNTL6Q49A17 601 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ATP6AP1LQ52LC2 224 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 FRG2Q64ET8 278 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ICE2Q659A1 982 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 TMEM198Q66K66 360 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 MED27Q6P2C8 311 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 LARP4Q71RC2 724 aaKnown RBP eCLIP9.31□□□□□ -0.923e-11■■□□□ 11.8
HNRNPC-220ENST00000555585 ADCK2Q7Z695 626 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CLNKQ7Z7G1 428 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 RBM12BQ8IXT5 1001 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 KRT78Q8N1N4 520 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ZBTB44Q8NCP5 570 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 OR10G6Q8NH81 332 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 REPS1Q96D71 796 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 PPP3R2Q96LZ3 170 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 FRG2BQ96QU4 278 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ELF4Q99607 663 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 MRPS30Q9NP92 439 aaKnown RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 SAR1AQ9NR31 198 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 UCKL1Q9NWZ5 548 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 SPHK1Q9NYA1 384 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 OR6C2Q9NZP2 312 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ARMCX1Q9P291 453 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 KMT2EQ8IZD2 1858 aa9.31□□□□□ -0.92
HNRNPC-220ENST00000555585 ARHGEF17Q96PE2 2063 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 GSAPA4D1B5 854 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 H0YIV9 168 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 BTN3A3O00478 584 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 POLR2CP19387 275 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 CXCR2P25025 360 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 PEBP1P30086 187 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 RXRGP48443 463 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 CCR8P51685 355 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 STX1BP61266 288 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 YBX1P67809 324 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 PHEXP78562 749 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 ABATP80404 500 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 HMGCS1Q01581 520 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 PRDX1Q06830 199 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 GRIK2Q13002 908 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 XKR7Q5GH72 579 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 ARMC6Q6NXE6 501 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 RNF165Q6ZSG1 346 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 Q6ZSR9 355 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 TMEM26Q6ZUK4 368 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 SPATA19Q7Z5L4 167 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 RABEPKQ7Z6M1 372 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 ZNF761Q86XN6 746 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 ADGRF3Q8IZF5 1079 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 ARL14Q8N4G2 192 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 GBP7Q8N8V2 638 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 AVL9Q8NBF6 648 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 OR2A1Q8NGT9 310 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 OR2T11Q8NH01 316 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 CEP76Q8TAP6 659 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 WDR20Q8TBZ3 569 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 USP7Q93009 1102 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 UBE2E3Q969T4 207 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 SLC22A18Q96BI1 424 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 WDR34Q96EX3 536 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 AIF1LQ9BQI0 150 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 CCDC106Q9BWC9 280 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 TBC1D10AQ9BXI6 508 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 EHD1Q9H4M9 534 aa9.3□□□□□ -0.92
HNRNPC-220ENST00000555585 FSCN3Q9NQT6 498 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms