RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ELOVL6Q9H5J4 265 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 XKR8Q9H6D3 395 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 BRF2Q9HAW0 419 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 RIC8BQ9NVN3 520 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 UCKL1Q9NWZ5 548 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 NLGN3Q9NZ94 848 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ANKMY1Q9P2S6 941 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ADGRE2Q9UHX3 823 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 FIS1Q9Y3D6 152 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 TIMM22Q9Y584 194 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 KLK4Q9Y5K2 254 aa7.38□□□□□ -1.23
TDP1-209ENST00000554180 ARHGEF17Q96PE2 2063 aaPredicted RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 PRAMEF33A0A0G2JMD5 474 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 GOLGA8QA0A0J9YX86 632 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PIPSLA2A3N6 862 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 GOLGA8OA6NCC3 632 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR5K3A6NET4 321 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 C2orf74A8MZ97 194 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 GOLGA8NF8WBI6 632 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SLC28A1O00337 649 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 FOXE1O00358 373 aaPredicted RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 BTN3A3O00478 584 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 FFAR3O14843 346 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 GPR42O15529 346 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 RGS14O43566 566 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PCDHGA12O60330 932 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 RSL1D1O76021 490 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 JUNP05412 331 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 PRR35P0CG20 571 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 ZNF883P0CG24 379 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 CDH1P12830 882 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PRPH2P23942 346 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 EPHA3P29320 983 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SERPINB3P29508 390 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 CMPK1P30085 196 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PEBP1P30086 187 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 ADSLP30566 484 aaPredicted RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 GRK3P35626 688 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 MPLP40238 635 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PIK3CBP42338 1070 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 CAPZBP47756 277 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PHEXP78562 749 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 REEP5Q00765 189 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 RELAQ04206 551 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 CSTF3Q12996 717 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 MAD2L1Q13257 205 aaPredicted RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 BIRC2Q13490 618 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SLBPQ14493 270 aaKnown RBP eCLIP7.37□□□□□ -1.23
TDP1-209ENST00000554180 NR1D2Q14995 579 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 HIST2H2ACQ16777 129 aaPredicted RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 SLC5A12Q1EHB4 618 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 DEFB133Q30KQ1 61 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 LSM12Q3MHD2 195 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 ATP6AP1LQ52LC2 224 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 VWA5B1Q5TIE3 1220 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 HIST2H2AA3Q6FI13 130 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 ZCCHC8Q6NZY4 707 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 MED27Q6P2C8 311 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 C6orf89Q6UWU4 347 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 LARP4Q71RC2 724 aaKnown RBP eCLIP7.37□□□□□ -1.23
TDP1-209ENST00000554180 TRPM8Q7Z2W7 1104 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 ZNF438Q7Z4V0 828 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OOSP2Q86WS3 158 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PARP9Q8IXQ6 854 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 DDIASQ8IXT1 998 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SLC25A45Q8N413 288 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 TBC1D19Q8N5T2 526 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 TTLQ8NG68 377 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR2L3Q8NG85 312 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR7G3Q8NG95 312 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR4E2Q8NGC2 313 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR4K1Q8NGD4 311 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR6C4Q8NGE1 309 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR4C6Q8NH72 309 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SAP25Q8TEE9 199 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SELENOMQ8WWX9 145 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 METTL2AQ96IZ6 378 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 PPP3R2Q96LZ3 170 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 OR52B2Q96RD2 323 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 AIF1LQ9BQI0 150 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SARGQ9BW04 601 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 ACAT2Q9BWD1 397 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 MYLK2Q9H1R3 596 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 TUBB1Q9H4B7 451 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 WDR55Q9H6Y2 383 aaPredicted RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 GAREM1Q9H706 876 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 NT5DC2Q9H857 520 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 MRPS30Q9NP92 439 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 TMEM184CQ9NVA4 438 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 GEMIN8Q9NWZ8 242 aaKnown RBP7.37□□□□□ -1.23
TDP1-209ENST00000554180 HEY2Q9UBP5 337 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 SH2B3Q9UQQ2 575 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 BTRCQ9Y297 605 aa7.37□□□□□ -1.23
TDP1-209ENST00000554180 PI4KAP42356 2102 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 FANCMQ8IYD8 2048 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 TRBV23OR9-2A0A075B6M9 112 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 OR6C74A6NCV1 312 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ISM1B1AKI9 464 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 E9PBE3 544 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms