RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 LANCL3Q6ZV70 420 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 PID1Q7Z2X4 250 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 BIVMQ86UB2 503 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 TAX1BP1Q86VP1 789 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 RFX6Q8HWS3 928 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 CRLF3Q8IUI8 442 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 DCUN1D3Q8IWE4 304 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 C2orf73Q8N5S3 287 aaPredicted RBP8.57□□□□□ -1.04
PRKCH-208ENST00000553846 OR2L3Q8NG85 312 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 OR2A1Q8NGT9 310 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 FAM57AQ8TBR7 257 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 LKAAEAR1Q8TD35 194 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 ELMO1Q92556 727 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 RNF25Q96BH1 459 aaPredicted RBP8.57□□□□□ -1.04
PRKCH-208ENST00000553846 OLFM1Q99784 485 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 VN1R1Q9GZP7 353 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 TRIM45Q9H8W5 580 aaPredicted RBP8.57□□□□□ -1.04
PRKCH-208ENST00000553846 KLHL1Q9NR64 748 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 INTS7Q9NVH2 962 aaKnown RBP8.57□□□□□ -1.04
PRKCH-208ENST00000553846 NLE1Q9NVX2 485 aaPredicted RBP8.57□□□□□ -1.04
PRKCH-208ENST00000553846 TRPC4Q9UBN4 977 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 RSPH14Q9UHP6 348 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 LCMT1Q9UIC8 334 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 TRHDEQ9UKU6 1024 aa8.57□□□□□ -1.04
PRKCH-208ENST00000553846 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
PRKCH-208ENST00000553846 IGHV3-20A0A0C4DH32 117 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 A0A0U1RQJ8 604 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 FAM90A27PA6NNH2 459 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 PRRG2O14669 202 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 NME2P1O60361 137 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CST8O60676 142 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 SEC24DO94855 1032 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 MLYCDO95822 493 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 FTH1P02794 183 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CYC1P08574 325 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 MYBL2P10244 700 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 NME2P22392 152 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CXCR2P25025 360 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 PSMB4P28070 264 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 EEF1DP29692 281 aaKnown RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CCR7P32248 378 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 NR0B1P51843 470 aaKnown RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 GEMP55040 296 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 PLOD1Q02809 727 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 NR1I3Q14994 352 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 BRD3Q15059 726 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 STX1AQ16623 288 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 SYT16Q17RD7 645 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 SKOR2Q2VWA4 1001 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CCSMST1Q4G0I0 132 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 KCTD11Q693B1 232 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 FBXO42Q6P3S6 717 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 ZNF449Q6P9G9 518 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 UNC5DQ6UXZ4 953 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CD163Q86VB7 1156 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 TMTC1Q8IUR5 882 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 WFDC11Q8NEX6 87 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 SPATA3Q8NHX4 192 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 ASB5Q8WWX0 329 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 CDKN2AIPNLQ96HQ2 116 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 C10orf88Q9H8K7 445 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 MKKSQ9NPJ1 570 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 ANO10Q9NW15 660 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 ANKRD10Q9NXR5 420 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 SMARCAL1Q9NZC9 954 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 COQ3Q9NZJ6 369 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 ZC3H7BQ9UGR2 993 aaKnown RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 TEKT2Q9UIF3 430 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 RUVBL1Q9Y265 456 aaKnown RBP8.56□□□□□ -1.04
PRKCH-208ENST00000553846 FAM169AQ9Y6X4 670 aa8.56□□□□□ -1.04
PRKCH-208ENST00000553846 hCG_1818297A0A087WSY0 165 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 A0A0J9YVX5 310 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 MROH6A6NGR9 719 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 H0YGG7 62 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 QSOX1O00391 747 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 OR1I1O60431 355 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 ANXA9O76027 345 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 TPOP07202 933 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 HEXBP07686 556 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 SP1P08047 785 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 C8orf89P0DMQ9 161 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 PYGBP11216 843 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 ERGP11308 486 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 ZNF24P17028 368 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 HOXC12P31275 282 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 TNNT3P45378 269 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 ARF3P61204 181 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 MESDQ14696 234 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 SF1Q15637 639 aaKnown RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 HKDC1Q2TB90 917 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 CMPK2Q5EBM0 449 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 CES4AQ5XG92 561 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 TMEM198Q66K66 360 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 Q71RC1 249 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 BZW1Q7L1Q6 419 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms