RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 ARF3P61204 181 aaPredicted RBP17.12■□□□□ 0.33
PNN-202ENST00000553331 SPANXN3Q5MJ09 141 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 UGT3A1Q6NUS8 523 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 CYHR1Q6ZMK1 362 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 ATCAYQ86WG3 371 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 IGDCC3Q8IVU1 814 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 GALNT16Q8N428 558 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 EFCAB3Q8N7B9 438 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 C2CD4AQ8NCU7 369 aaPredicted RBP17.12■□□□□ 0.33
PNN-202ENST00000553331 GABPB2Q8TAK5 448 aaPredicted RBP17.12■□□□□ 0.33
PNN-202ENST00000553331 CPT1CQ8TCG5 803 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 PLCD4Q9BRC7 762 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 ZNF304Q9HCX3 659 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 SLC17A6Q9P2U8 582 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 PCDHGB7Q9Y5F8 929 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 KLK4Q9Y5K2 254 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
PNN-202ENST00000553331 HEATR5BQ9P2D3 2071 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 NUP210LQ5VU65 1888 aa17.12■□□□□ 0.33
PNN-202ENST00000553331 TTC4O95801 387 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 IGHEP01854 428 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 ALBP02768 609 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 C2orf54Q08AI8 447 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 VWA5B1Q5TIE3 1220 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 PAQR7Q86WK9 346 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 CSNK1A1LQ8N752 337 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 EEF1AKMT1Q8WVE0 214 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 ALKBH8Q96BT7 664 aaKnown RBP17.11■□□□□ 0.33
PNN-202ENST00000553331 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
PNN-202ENST00000553331 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 WDR54Q9H977 334 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 ATP13A2Q9NQ11 1180 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 SLAMF7Q9NQ25 335 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 FBXL4Q9UKA2 621 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 CHMP2BQ9UQN3 213 aa17.11■□□□□ 0.33
PNN-202ENST00000553331 IGKV1-8A0A0C4DH67 115 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 E7ENX8 843 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 GFYI3L273 518 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 AGPSO00116 658 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 TP73O15350 636 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 STATHP02808 62 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 FBLP22087 321 aaKnown RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 MMP11P24347 488 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 ITGA3P26006 1051 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 ELK3P41970 407 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 TAP2Q03519 686 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 OCA2Q04671 838 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 PRDX1Q06830 199 aaKnown RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 RBBP7Q16576 425 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 MUM1Q2TAK8 710 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 HKDC1Q2TB90 917 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 RBM20Q5T481 1227 aaKnown RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 JMJD6Q6NYC1 403 aaPredicted RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 PLD3Q8IV08 490 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 PALM2Q8IXS6 379 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 RBMXL3Q8N7X1 1067 aaKnown RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 FBXO15Q8NCQ5 510 aaPredicted RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 RERGQ96A58 199 aaPredicted RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 CERS2Q96G23 380 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 C10orf90Q96M02 699 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 SPSB2Q99619 263 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 SMAD5Q99717 465 aaKnown RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 CUEDC1Q9NWM3 386 aaPredicted RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
PNN-202ENST00000553331 TAS2R13Q9NYV9 303 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 ANKMY1Q9P2S6 941 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 ADAMTS6Q9UKP5 1117 aa17.1■□□□□ 0.33
PNN-202ENST00000553331 SOCS6O14544 535 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 FFAR3O14843 346 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 HAT1O14929 419 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 GPR42O15529 346 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 VPS4BO75351 444 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 ONECUT2O95948 504 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 AHSGP02765 367 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 GABRB3P28472 473 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 IMPA1P29218 277 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 RGS4P49798 205 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 PGGT1BP53609 377 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 ITGA8P53708 1063 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 CDKN2DP55273 166 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 MRPS25P82663 173 aaKnown RBP17.09■□□□□ 0.33
PNN-202ENST00000553331 MYBPC3Q14896 1274 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 MORF4L2Q15014 288 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 PRR30Q53SZ7 412 aaPredicted RBP17.09■□□□□ 0.33
PNN-202ENST00000553331 HIBCHQ6NVY1 386 aaPredicted RBP17.09■□□□□ 0.33
PNN-202ENST00000553331 PAQR3Q6TCH7 311 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 MBOAT1Q6ZNC8 495 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 ANKMY2Q8IV38 441 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 GPATCH11Q8N954 259 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 MCOLN3Q8TDD5 553 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 MIEF2Q96C03 454 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 LINGO1Q96FE5 620 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 NAT9Q9BTE0 207 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 CRB3Q9BUF7 120 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 SLC26A1Q9H2B4 701 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 SYNPO2LQ9H987 977 aa17.09■□□□□ 0.33
PNN-202ENST00000553331 ZNF282Q9UDV7 671 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms