RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 OLIG1Q8TAK6 271 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 AP2M1Q96CW1 435 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 TBC1D31Q96DN5 1066 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PRAM1Q96QH2 718 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 C17orf62Q9BQA9 187 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 LRRC4Q9HBW1 653 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 P4HTMQ9NXG6 502 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 RUVBL2Q9Y230 463 aaKnown RBP4.66□□□□□ -1.66
SCFD1-209ENST00000553280 TDRKHQ9Y2W6 561 aaKnown RBP4.66□□□□□ -1.66
SCFD1-209ENST00000553280 TEX264Q9Y6I9 313 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 DHX29Q7Z478 1369 aaKnown RBP4.65□□□□□ -1.66
SCFD1-209ENST00000553280 CKAP5Q14008 2032 aa4.65□□□□□ -1.66
SCFD1-209ENST00000553280 IGLV5-45A0A087WSX0 123 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 A0A1W2PN81 502 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 A0A1W2PS18 150 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 SYCE3A1L190 88 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 FAM149AA5PLN7 773 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 C5orf51A6NDU8 294 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 ANKRD61A6NGH8 418 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 F8VVB4 439 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 F8VWA3 439 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 NPIPA3F8WFD2 350 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 PRKRAO75569 313 aaKnown RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 B3GALNT1O75752 331 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 BMP15O95972 392 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 IGHV4-39P01824 125 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 ITGB6P18564 788 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 IL10P22301 178 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 MAPK3P27361 379 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 CHRNA7P36544 502 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 CD86P42081 329 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 MAGEB1P43366 347 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 B3GALT5-AS1P59052 145 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 AKAP17AQ02040 695 aaKnown RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 IL10RBQ08334 325 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 LGALS3BPQ08380 585 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 TAF10Q12962 218 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 UGP2Q16851 508 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 KIF19Q2TAC6 998 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 FAM46CQ5VWP2 391 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 UNQ6126/PRO20091Q6UXV3 157 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 KCTD8Q6ZWB6 473 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 TUBA1AQ71U36 451 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 MAPKAPK5-AS1Q8N8E1 139 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 C9orf106Q8NAJ2 232 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 OR2T12Q8NG77 320 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 OR10Q1Q8NGQ4 319 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 RNASE8Q8TDE3 154 aaKnown RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF473Q8WTR7 871 aaKnown RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 PHLDA1Q8WV24 401 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 RASL10BQ96S79 203 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 MAP3K3Q99759 626 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 TUBA1CQ9BQE3 449 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 SDCBP2Q9H190 292 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 UBQLN3Q9H347 655 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 ZBTB20Q9HC78 741 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 PRMT8Q9NR22 394 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 SDR39U1Q9NRG7 319 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 PHPT1Q9NRX4 125 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-209ENST00000553280 GPR173Q9NS66 373 aa4.65□□□□□ -1.67
SCFD1-209ENST00000553280 TTC3P53804 2025 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 KRT87PA6NCN2 255 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 CCDC69A6NI79 296 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 C2orf81A6NN90 581 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 H0YIG0 161 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 CAPN9O14815 690 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 XPNPEP2O43895 674 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 PRPSAP2O60256 369 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 SP9P0CG40 484 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 GP1BBP13224 206 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 MSH3P20585 1137 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 CA4P22748 312 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 CALRP27797 417 aaKnown RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 CASP9P55211 416 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 MAZP56270 477 aaKnown RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 IFI44LQ53G44 452 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 DCAF10Q5QP82 559 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF770Q6IQ21 691 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 RTN4RL2Q86UN3 420 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 NEUROG1Q92886 237 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 EPSTI1Q96J88 318 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 RUNDC3BQ96NL0 473 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 TSSK2Q96PF2 358 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 RUFY1Q96T51 708 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 NDNQ99608 321 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF559Q9BR84 538 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 URM1Q9BTM9 101 aaKnown RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 IDI2Q9BXS1 227 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 LAT2Q9GZY6 243 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 ABCG8Q9H221 673 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 C1orf21Q9H246 121 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 RIMS4Q9H426 269 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 MAGEF1Q9HAY2 307 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 MRPL17Q9NRX2 175 aaKnown RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 FGF21Q9NSA1 209 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 NOCTQ9UK39 431 aaKnown RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 RPH3AQ9Y2J0 694 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-209ENST00000553280 IL16Q14005 1332 aa4.64□□□□□ -1.67
SCFD1-209ENST00000553280 TRAV18A0A075B6X5 111 aa4.63□□□□□ -1.67
SCFD1-209ENST00000553280 A0A087X0K7 114 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms