RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CXCL10P02778 98 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 FAM106CPP0CH98 169 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 HSPA5P11021 654 aaKnown RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ACP2P11117 423 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 SKILP12757 684 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 CKMT2P17540 419 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 CBLP22681 906 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 SSTR1P30872 391 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 CDKN1AP38936 164 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 MLLT10P55197 1068 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 IRX4P78413 519 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ROR2Q01974 943 aaKnown RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 RUNX1T1Q06455 604 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 DSC1Q08554 894 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 RASGEF1BQ0VAM2 473 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 GPS2Q13227 327 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 DHX34Q14147 1143 aaKnown RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 TRIP6Q15654 476 aaKnown RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 CEBPEQ15744 281 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 PHKG1Q16816 387 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 RIPPLY2Q5TAB7 128 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 SLC25A24Q6NUK1 477 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 FUT10Q6P4F1 479 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 PACS1Q6VY07 963 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 GPR141Q7Z602 305 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ZER1Q7Z7L7 766 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 LAX1Q8IWV1 398 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 DNAJC10Q8IXB1 793 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 GPALPP1Q8IXQ4 340 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 LGI2Q8N0V4 545 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 FGFBP3Q8TAT2 258 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 CHURC1Q8WUH1 139 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 IRGQQ8WZA9 623 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ABTB1Q969K4 478 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 COQ8BQ96D53 544 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 SGK494Q96LW2 274 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 NEURL2Q9BR09 285 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 RIBC2Q9H4K1 309 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ACTL8Q9H568 366 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 COQ10BQ9H8M1 238 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 MRPL17Q9NRX2 175 aaKnown RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ADARB2Q9NS39 739 aaKnown RBP5.42□□□□□ -1.54
SCFD1-208ENST00000553278 DCAF16Q9NXF7 216 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 DONSONQ9NYP3 566 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 U3KQV3 271 aa5.42□□□□□ -1.54
SCFD1-208ENST00000553278 ZCWPW2A0A1B0GU75 182 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ANGPT2O15123 496 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ARPC2O15144 300 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ZNHIT1O43257 154 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SCO2O43819 266 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 TFAP2AP05549 437 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 LIPFP07098 398 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 TPBGLP0DKB5 382 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 GM2AP17900 193 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 HOXD3P31249 432 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ARRB2P32121 409 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 GLIPR1P48060 266 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SLC6A12P48065 614 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 FMO5P49326 533 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ARFIP1P53367 373 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SEC61A1P61619 476 aaKnown RBP5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ZNF415Q09FC8 603 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ABRQ12979 859 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 MYBPHQ13203 477 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 PRTGQ2VWP7 1150 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 Q4G0T1 1027 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ASPRV1Q53RT3 343 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SIGLEC15Q6ZMC9 328 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 RGS9BPQ6ZS82 235 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ANKRD33Q7Z3H0 272 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 MMD2Q8IY49 270 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCFD1-208ENST00000553278 THEM5Q8N1Q8 247 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 NEXN-AS1Q8NBZ9 246 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 C16orf52Q8NHV5 167 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 GGHQ92820 318 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 RAB7BQ96AH8 199 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SPAG8Q99932 426 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-208ENST00000553278 SLC39A8Q9C0K1 460 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 ARRDC1-AS1Q9H2J1 176 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 PIGVQ9NUD9 493 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 TMOD2Q9NZR1 351 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 PLA2G4CQ9UP65 541 aa5.41□□□□□ -1.54
SCFD1-208ENST00000553278 TEX13DA0A0J9YY54 714 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 A0A1B0GVT2 93 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 CLRN2A0PK11 232 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 OR6C75A6NL08 312 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 F8WDY8 70 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 SLC28A1O00337 649 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 MID1O15344 667 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 WDR1O75083 606 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 SCGB2A1O75556 95 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 CLDN14O95500 239 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 AK1P00568 194 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 MYOD1P15172 320 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 NSFP46459 744 aaKnown RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 RFX2P48378 723 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 HNMTP50135 292 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 VAMP7P51809 220 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ISL1P61371 349 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms