RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 UQCRHP07919 91 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 STSP08842 583 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 MCM3P25205 808 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 AOAHP28039 575 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 GRIA3P42263 894 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 ITGA8P53708 1063 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 MRPS25P82663 173 aaKnown RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 HSPA14Q0VDF9 509 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 CDC16Q13042 620 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 FAM214AQ32MH5 1076 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 ANKRD20A4Q4UJ75 823 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 ISLR2Q6UXK2 745 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 LMNTD1Q8N9Z9 388 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 SIGLEC10Q96LC7 697 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 SELENOSQ9BQE4 189 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 EPS8L2Q9H6S3 715 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 CTSFQ9UBX1 484 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 SNX24Q9Y343 169 aa11.32□□□□□ -0.6
CKAP4-202ENST00000552828 UTP11Q9Y3A2 253 aaKnown RBP11.32□□□□□ -0.6
CKAP4-202ENST00000552828 ANKRD12Q6UB98 2062 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 FBN2P35556 2912 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 A0A1W2PQ72 361 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 PFDN6O15212 129 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 CTSVO60911 334 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 USP1O94782 785 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 HPP00738 406 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 RPL21P46778 160 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 OR1D4P47884 311 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 TTPAP49638 278 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 CSE1LP55060 971 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 DHX9Q08211 1270 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 CALCOCO2Q13137 446 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 MFAP5Q13361 173 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 SF1Q15637 639 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 RBBP7Q16576 425 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 ATG9BQ674R7 924 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 KIAA0930Q6ICG6 404 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 MRNIPQ6NTE8 343 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 C2orf73Q8N5S3 287 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 OTUD6BQ8N6M0 293 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 TTC29Q8NA56 475 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 HMGCLL1Q8TB92 370 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 RELTQ969Z4 430 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 ZNF669Q96BR6 464 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 THOC3Q96J01 351 aaKnown RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 IL17FQ96PD4 163 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 RAB11FIP5Q9BXF6 653 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 RAB17Q9H0T7 212 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 SOX17Q9H6I2 414 aaPredicted RBP11.31□□□□□ -0.6
CKAP4-202ENST00000552828 WHRNQ9P202 907 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 TACC2O95359 2948 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 PDZD2O15018 2839 aa11.31□□□□□ -0.6
CKAP4-202ENST00000552828 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 IGLV3-12A0A075B6K2 115 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 A0A1B0GUH1 482 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 HYKKA2RU49 373 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 ZG16O60844 167 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 NDUFS3O75489 264 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 KLHL18O94889 574 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 MED26O95402 600 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 TTC4O95801 387 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 APOA4P06727 396 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 PRF1P14222 555 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 PGAM1P18669 254 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 ARNTP27540 789 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 SOX11P35716 441 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 ARL4CP56559 192 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 KLC1Q07866 573 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 THOC5Q13769 683 aaKnown RBP11.3□□□□□ -0.6
CKAP4-202ENST00000552828 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 WASHC2DQ5SRD0 308 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 DUPD1Q68J44 220 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 NEPROQ6NW34 567 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 SHISA6Q6ZSJ9 500 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 LDB1Q86U70 411 aaPredicted RBP11.3□□□□□ -0.6
CKAP4-202ENST00000552828 AGGF1Q8N302 714 aaeCLIP11.3□□□□□ -0.6
CKAP4-202ENST00000552828 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 CATSPER1Q8NEC5 780 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 CFAP61Q8NHU2 1237 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 STT3BQ8TCJ2 826 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 PSMF1Q92530 271 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
CKAP4-202ENST00000552828 TCF12Q99081 682 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms