RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SETXQ7Z333 2677 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF462Q96JM2 2506 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 COL12A1Q99715 3063 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TYW5A2RUC4 315 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 FAM149AA5PLN7 773 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 IGLON5A6NGN9 336 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TLR4O00206 839 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 KPNA3O00505 521 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 DSCR3O14972 297 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TLX3O43711 291 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 CREB3O43889 395 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 NEBLO76041 1014 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 CER1O95813 267 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SERPING1P05155 500 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 PROS1P07225 676 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ACADMP11310 421 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 DPP6P42658 865 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 HCAR3P49019 387 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 NEK3P51956 506 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 AIF1P55008 147 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 UBASH3AP57075 661 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ST8SIA6P61647 398 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 CFHR3Q02985 330 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 GBE1Q04446 702 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 NIPAL4Q0D2K0 466 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ZBTB17Q13105 803 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 PAFAH1B3Q15102 231 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 IRF4Q15306 451 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TRIP6Q15654 476 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SMAD1Q15797 465 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 WSCD2Q2TBF2 565 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 MYLK3Q32MK0 819 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 PARP15Q460N3 678 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TMEM52BQ4KMG9 183 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 INO80DQ53TQ3 878 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF805Q5CZA5 627 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ERMARDQ5T6L9 678 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 RWDD4Q6NW29 188 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SARM1Q6SZW1 724 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 CCNI2Q6ZMN8 369 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TSPAN33Q86UF1 283 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 CAMK1DQ8IU85 385 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SDR16C5Q8N3Y7 309 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TEX26Q8N6G2 289 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 PRSS3P2Q8NHM4 247 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ARRDC2Q8TBH0 407 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 RFFLQ8WZ73 363 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 RAPGEF5Q92565 580 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SERAC1Q96JX3 654 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 OLFM3Q96PB7 478 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 FCRL4Q96PJ5 515 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 MCCC1Q96RQ3 725 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TRIB3Q96RU7 358 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 MGME1Q9BQP7 344 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 LRRC61Q9BV99 259 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 NUP85Q9BW27 656 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 RETREG1Q9H6L5 497 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ZDHHC6Q9H6R6 413 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ERVMER34-1Q9H9K5 563 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ASH1LQ9NR48 2969 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ABHD10Q9NUJ1 306 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 TUBA8Q9NY65 449 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-214ENST00000550893 STEAP1Q9UHE8 339 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 ANGPTL2Q9UKU9 493 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SNX13Q9Y5W8 968 aa4.83□□□□□ -1.64
SCAF11-214ENST00000550893 SPTY2D1-AS1A0A0U1RR47 76 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 NPIPB15A6NHN6 443 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 LRRC72A6NJI9 287 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SRRM3A6NNA2 597 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SMTNL1A8MU46 457 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 A8MVJ9 347 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 EEF2KO00418 725 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SLC31A1O15431 190 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 FLRT2O43155 660 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SNX2O60749 519 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PROSCO94903 275 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 MOCS3O95396 460 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 LCA5LO95447 670 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 HLA-DQB2P05538 268 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ANXA2P07355 339 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 THEGLP0DJG4 465 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PECAM1P16284 738 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 HNRNPA2B1P22626 353 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 DGKAP23743 735 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 RBL1P28749 1068 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 HTR7P34969 479 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 CSNK1DP48730 415 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 NDST2P52849 883 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 YBEYP58557 167 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 TPI1P60174 286 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 MAXP61244 160 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 KRT83P78385 493 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 GALNT2Q10471 571 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 MTA1Q13330 715 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SEC23BQ15437 767 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 CNGA3Q16281 694 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SLC18A3Q16572 532 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms