RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TRIP13Q15645 432 aaPredicted RBP19.4■□□□□ 0.7
SSH1-207ENST00000547862 HKDC1Q2TB90 917 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 ACSBG2Q5FVE4 666 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 RNF187Q5TA31 235 aaPredicted RBP19.4■□□□□ 0.7
SSH1-207ENST00000547862 PRMT9Q6P2P2 845 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 ADCK2Q7Z695 626 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 CSNK1A1LQ8N752 337 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 OR1N1Q8NGS0 311 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 OR9A1PQ8NGU1 263 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 BRIX1Q8TDN6 353 aaKnown RBP19.4■□□□□ 0.7
SSH1-207ENST00000547862 BIRC8Q96P09 236 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 SYNPO2LQ9H987 977 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 PLA2G3Q9NZ20 509 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 RUVBL1Q9Y265 456 aaKnown RBP19.4■□□□□ 0.7
SSH1-207ENST00000547862 CELSR2Q9HCU4 2923 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 TCRBV7S3A2A0A539 114 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 SYF2O95926 243 aaKnown RBP19.39■□□□□ 0.69
SSH1-207ENST00000547862 STATHP02808 62 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 NAA25Q14CX7 972 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 CCNG2Q16589 344 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 TYSND1Q2T9J0 566 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 KLHL38Q2WGJ6 581 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 MEI1Q5TIA1 1274 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 B3GNTL1Q67FW5 361 aaPredicted RBP19.39■□□□□ 0.69
SSH1-207ENST00000547862 CASC4Q6P4E1 433 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 LAPTM4BQ86VI4 370 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 KBTBD2Q8IY47 623 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 COG1Q8WTW3 980 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 FAR1Q8WVX9 515 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 TRIM56Q9BRZ2 755 aaKnown RBP19.39■□□□□ 0.69
SSH1-207ENST00000547862 PCYOX1Q9UHG3 505 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 SOX13Q9UN79 622 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 KLK4Q9Y5K2 254 aa19.39■□□□□ 0.69
SSH1-207ENST00000547862 GOLGA6L6A8MZA4 724 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 IDSB3KWA1 339 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 PFDN6O15212 129 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 FGGP02679 453 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 COX6A1P12074 109 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 EDN3P14138 238 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 EMP2P54851 167 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 PER3P56645 1201 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 CUL1Q13616 776 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 SYT16Q17RD7 645 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 PRTGQ2VWP7 1150 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 ANKRD20A4Q4UJ75 823 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 FJX1Q86VR8 437 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 SMPDL3AQ92484 453 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 MMABQ96EY8 250 aaPredicted RBP19.38■□□□□ 0.69
SSH1-207ENST00000547862 PLCD4Q9BRC7 762 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 KIFC1Q9BW19 673 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 OLAHQ9NV23 265 aa19.38■□□□□ 0.69
SSH1-207ENST00000547862 DYTNA2CJ06 578 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 H3BMM5 538 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 AP3B1O00203 1094 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 ZG16O60844 167 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 AVILO75366 819 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 USP1O94782 785 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 MATN4O95460 622 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 ESR1P03372 595 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 CATP04040 527 aaKnown RBP19.37■□□□□ 0.69
SSH1-207ENST00000547862 HEXBP07686 556 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 ANXA5P08758 320 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 CXCR2P25025 360 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 ATP5DP30049 168 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 CDC25BP30305 580 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 PNLIPRP1P54315 467 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 GBX1Q14549 363 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 KCNJ11Q14654 390 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 C1QL3Q5VWW1 255 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 FBXO42Q6P3S6 717 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 LRRC8BQ6P9F7 803 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 PAQR7Q86WK9 346 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 PLD3Q8IV08 490 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 AMER2Q8N7J2 671 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 RERGQ96A58 199 aaPredicted RBP19.37■□□□□ 0.69
SSH1-207ENST00000547862 ZNF669Q96BR6 464 aaPredicted RBP19.37■□□□□ 0.69
SSH1-207ENST00000547862 PKP4Q99569 1192 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 LZTFL1Q9NQ48 299 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 FAM114A2Q9NRY5 505 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 CDC14AQ9UNH5 594 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 DRG1Q9Y295 367 aaKnown RBP19.37■□□□□ 0.69
SSH1-207ENST00000547862 POLEQ07864 2286 aa19.37■□□□□ 0.69
SSH1-207ENST00000547862 A0A0A6YYC8 382 aaPredicted RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 IGKV1-8A0A0C4DH67 115 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 ARHGAP10A1A4S6 786 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 I3L1I5 382 aaPredicted RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 P2RX6O15547 441 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 PRPF4O43172 522 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSH1-207ENST00000547862 PRR35P0CG20 571 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 ERGP11308 486 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 PKMP14618 531 aaKnown RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 PAMP19021 973 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 TPSB2P20231 275 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 OGNP20774 298 aaKnown RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 KCNK10P57789 538 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 MAT1AQ00266 395 aaKnown RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 SRSF11Q05519 484 aaKnown RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 DSG2Q14126 1118 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 TPSAB1Q15661 275 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms