RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CCDC90BQ9GZT6 254 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 SLC28A3Q9HAS3 691 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 PAPOLBQ9NRJ5 636 aaKnown RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 SLC23A2Q9UGH3 650 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 CACNA1IQ9P0X4 2223 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 PDZK1P1A8MUH7 402 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 KAT7O95251 611 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 TNFAIP8O95379 198 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 ENGP17813 658 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 DDX6P26196 483 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 CES5AQ6NT32 575 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 HACD2Q6Y1H2 254 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 MSRB3Q8IXL7 192 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 TERB1Q8NA31 727 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 GBF1Q92538 1859 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 RMND5BQ96G75 393 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 DCUN1D5Q9BTE7 237 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 GULP1Q9UBP9 304 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 TRPS1Q9UHF7 1281 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 TMCO1Q9UM00 188 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 AQP12BA6NM10 295 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 PTGES3LE9PB15 166 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 H0Y858 1186 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 MYO1DO94832 1006 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 JAK1P23458 1154 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 GJA4P35212 333 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 CLCNKAP51800 687 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 MAD2L1Q13257 205 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 LCN8Q6JVE9 175 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 C8orf82Q6P1X6 216 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-209ENST00000547018 AQP12AQ8IXF9 295 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 DHRSXQ8N5I4 330 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 OR7G3Q8NG95 312 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 SDCCAG3Q96C92 435 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 DTD2Q96FN9 168 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 ZDHHC7Q9NXF8 308 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 RAB26Q9ULW5 256 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 COL6A3P12111 3177 aa12.31□□□□□ -0.44
SCAF11-209ENST00000547018 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 AGAP14A8MT82 685 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 ALBP02768 609 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 HNRNPA1P09651 372 aaKnown RBP eCLIP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 CBSLP0DN79 551 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 PSMA3P25788 255 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 CBSP35520 551 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 CRATP43155 626 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 EPHA5P54756 1037 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 PLEKHS1Q5SXH7 462 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 TECPR1Q7Z6L1 1165 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 FGF14Q92915 247 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 SLC47A1Q96FL8 570 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 FAM129BQ96TA1 746 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF451Q9Y4E5 1061 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 OBSL1O75147 1896 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 TFAP2AP05549 437 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 KLK1P06870 262 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 CDH1P12830 882 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 CD9P21926 228 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 ELK4P28324 431 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 P2RY2P41231 377 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 RPS9P46781 194 aaKnown RBP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 EEFSECP57772 596 aaKnown RBP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 ELAVL3Q14576 367 aaKnown RBP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 TTC23LQ6PF05 361 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 VITQ6UXI7 678 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 DPPA4Q7L190 304 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 LRRC70Q7Z2Q7 622 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 TMEM132CQ8N3T6 1108 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 METTL25Q8N6Q8 603 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 AGPAT4Q9NRZ5 378 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
SCAF11-209ENST00000547018 TDRD6O60522 2096 aaKnown RBP12.3□□□□□ -0.44
SCAF11-209ENST00000547018 OR52A4PA6NMU1 304 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 WASHC1A8K0Z3 465 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 H7BY64 318 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 GFYI3L273 518 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 CLIC1O00299 241 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 YY2O15391 372 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 FOXD2O60548 495 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 IL6P05231 212 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ALPPL2P10696 532 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 LRRC74AQ0VAA2 488 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MERTKQ12866 999 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ILF2Q12905 390 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 CAMK2GQ13555 558 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 DMC1Q14565 340 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 KIAA0040Q15053 153 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ERN2Q76MJ5 926 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 OR52J3Q8NH60 311 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 WDR48Q8TAF3 677 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 CIDECQ96AQ7 238 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms