RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NEUROG3Q9Y4Z2 214 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 POLR3HQ9Y535 204 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 RAI2Q9Y5P3 530 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PTGDR2Q9Y5Y4 395 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PLXNA3P51805 1871 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ANKRD36A6QL64 1941 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 A0A1W2PQ67 120 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 HTR3EA5X5Y0 456 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MEIS3P2A8K0S8 358 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 LOC110117498-PIK3R3F6TDL0 507 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 BOLA2-SMG1P6H3BVE0 249 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MANBAO00462 879 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 OR7A17O14581 309 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 KPNA5O15131 536 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 HS6ST1O60243 411 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 KDM1AO60341 852 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 DFNA5O60443 496 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MPZL2O60487 215 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SOCS5O75159 536 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CLDN9O95484 217 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 NADKO95544 446 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PRLP01236 227 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SEMG1P04279 462 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 C8GP07360 202 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SRPRAP08240 638 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ARSAP15289 507 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 HOXB9P17482 250 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CTPS1P17812 591 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PRPS1L1P21108 318 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PRDX3P30048 256 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 IDUAP35475 653 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ATP5C1P36542 298 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ETV6P41212 452 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 AGTR2P50052 363 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PNLIPRP1P54315 467 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 GP2P55259 537 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ITGA1P56199 1179 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MTPNP58546 118 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 DEFA1P59665 94 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 DEFA3P59666 94 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 COPZ1P61923 177 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 RPS14P62263 151 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 FAM189BP81408 668 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 IL5RAQ01344 420 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 EMX1Q04741 257 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CSTF3Q12996 717 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MTAPQ13126 283 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 GPR17Q13304 367 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF177Q13360 481 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SELPLGQ14242 412 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 GALNT3Q14435 633 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 IHHQ14623 411 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CLCA4Q14CN2 919 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SPCS2Q15005 226 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 NPTX1Q15818 432 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 INAQ16352 499 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MEP1AQ16819 746 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ZIK1Q3SY52 487 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 FAM174BQ3ZCQ3 159 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 USP39Q53GS9 565 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PYCR3Q53H96 274 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ZRANB3Q5FWF4 1079 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ATAD3BQ5T9A4 648 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 DEPDC1Q5TB30 811 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 IL31Q6EBC2 164 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PTRHD1Q6GMV3 140 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 NEK5Q6P3R8 708 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 FAHD1Q6P587 224 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CCDC80Q76M96 950 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 EIF3MQ7L2H7 374 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CTU1Q7Z7A3 348 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 RALGPS2Q86X27 583 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PLD3Q8IV08 490 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ZDHHC21Q8IVQ6 265 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SLC30A8Q8IWU4 369 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PAF1Q8N7H5 531 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 EFHBQ8N7U6 833 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 L3MBTL4Q8NA19 623 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SIDT2Q8NBJ9 832 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 OR10A6Q8NH74 314 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 FBXO30Q8TB52 745 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SETD6Q8TBK2 473 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 FAM110BQ8TC76 370 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PIK3R3Q92569 461 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 NELL1Q92832 810 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 NCLNQ969V3 563 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CXorf40BQ96DE9 158 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 OR52E6Q96RD3 313 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CSF3RQ99062 836 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ACOX2Q99424 681 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 RAD9AQ99638 391 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ITPAQ9BY32 194 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 GABARAPL3Q9BY60 117 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 NXF2Q9GZY0 626 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 ELAC1Q9H777 363 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms