RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 CHRNA5P30532 468 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 SLC19A1P41440 591 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 KIR2DL3P43628 341 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZNF267Q14586 743 aaPredicted RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 TSNQ15631 228 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 GRK1Q15835 563 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 TSTQ16762 297 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 FAM214AQ32MH5 1076 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 FBXO47Q5MNV8 452 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 FAM219BQ5XKK7 198 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 SERPINA11Q86U17 422 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 TLK2Q86UE8 772 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 LAX1Q8IWV1 398 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 AKAP1Q92667 903 aaKnown RBP eCLIP10.05□□□□□ -0.8
TCF4-209ENST00000544241 PMEPA1Q969W9 287 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 OR52E6Q96RD3 313 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 AARSD1Q9BTE6 412 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 TMEM39BQ9GZU3 492 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 KCNH6Q9H252 994 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ATXN3LQ9H3M9 355 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 PIGUQ9H490 435 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 EXOSC4Q9NPD3 245 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 GLS2Q9UI32 602 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZNF490Q9ULM2 529 aaPredicted RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 ABCG2Q9UNQ0 655 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 PCDHGB3Q9Y5G1 929 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ALG5Q9Y673 324 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 AP1M2Q9Y6Q5 423 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 MGAMO43451 1857 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 A0A1B0GVM2 712 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 FAM240BA0A1B0GVZ2 78 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZBTB42B2RXF5 422 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZNF670-ZNF695F2Z2N8 137 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 RHOBTB1O94844 696 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 OR4F21O95013 312 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 HLA-DQB2P05538 268 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 CSF3P09919 207 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ARF4P18085 180 aaPredicted RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 RPS3P23396 243 aaKnown RBP eCLIP10.05□□□□□ -0.8
TCF4-209ENST00000544241 PRDX3P30048 256 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 CXCR3P49682 368 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 RENBPP51606 427 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 CYP4F2P78329 520 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 MGAT3Q09327 533 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 KCNC3Q14003 757 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 DSC3Q14574 896 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 PYDC2Q56P42 97 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 SAXO2Q658L1 398 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 GPR153Q6NV75 609 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 BRAT1Q6PJG6 821 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 KLHL17Q6TDP4 642 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ATCAYQ86WG3 371 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ADGRG3Q86Y34 549 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
TCF4-209ENST00000544241 CLDN22Q8N7P3 220 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZNF557Q8N988 423 aaPredicted RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZNF680Q8NEM1 530 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 NDRG1Q92597 394 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 RNF34Q969K3 372 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 UBE2FQ969M7 185 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 FUBP1Q96AE4 644 aaKnown RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 DIRAS2Q96HU8 199 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 GPR137Q96N19 417 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 TTPALQ9BTX7 342 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 CNPPD1Q9BV87 410 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 IKZF5Q9H5V7 419 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ERVMER34-1Q9H9K5 563 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 FOLH1BQ9HBA9 442 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ATP13A1Q9HD20 1204 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 GPR83Q9NYM4 423 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 SLC25A37Q9NYZ2 338 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 GALPQ9UBC7 116 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 ZNF214Q9UL59 606 aaPredicted RBP10.05□□□□□ -0.8
TCF4-209ENST00000544241 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
TCF4-209ENST00000544241 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 WASHC1A8K0Z3 465 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SLC28A1O00337 649 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 TSC22D2O75157 780 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 OTCP00480 354 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 CSF2P04141 144 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SCG5P05408 212 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 IQCF3P0C7M6 154 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 NAT2P11245 290 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SLC2A4P14672 509 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 F8A1P23610 371 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 EPHA2P29317 976 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 HLA-FP30511 346 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 RPS19P39019 145 aaKnown RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 BRCC3P46736 316 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ARPP19P56211 112 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 RIN1Q13671 783 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 VEPH1Q14D04 833 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 LAPTM4AQ15012 233 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 AMHR2Q16671 573 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ZMAT1Q5H9K5 638 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 CLLU1Q5K131 121 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms