RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 GALNT1Q10472 559 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CBLBQ13191 982 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SCARB2Q14108 478 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 C12orf40Q86WS4 652 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SYNPOQ8N3V7 929 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 DNAJB14Q8TBM8 379 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 LPPQ93052 612 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TMEM80Q96HE8 168 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FCRL4Q96PJ5 515 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TAPBPLQ9BX59 468 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RANBP3Q9H6Z4 567 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 MEAF6Q9HAF1 191 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 NLE1Q9NVX2 485 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 COPS7AQ9UBW8 275 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 LOC100506127A0A0U1RQW1 187 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 AGPSO00116 658 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SLC31A1O15431 190 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 PRODHO43272 600 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SLC35G6P0C7Q6 338 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 BMP6P22004 513 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ALAS2P22557 587 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 PRKCHP24723 683 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FGL1Q08830 312 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF155Q12901 538 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 QPCTQ16769 361 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ERMP1Q7Z2K6 904 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF440Q8IYI8 595 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SLC7A13Q8TCU3 470 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 HDAC10Q969S8 669 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ELMO3Q96BJ8 720 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZDHHC12Q96GR4 267 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FCRL2Q96LA5 508 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF641Q96N77 438 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 HEPHQ9BQS7 1158 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZPBPQ9BS86 351 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 KCNH6Q9H252 994 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TMEM184CQ9NVA4 438 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 GPC6Q9Y625 555 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 C2orf71A6NGG8 1288 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 KIAA0355O15063 1070 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 GADD45GO95257 159 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 C2P06681 752 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ZSCAN5DPP0CG00 497 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 F8A1P23610 371 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 VIPR1P32241 457 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SIGLEC14Q08ET2 396 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 RBBP4Q09028 425 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 PTGR1Q14914 329 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SMAD1Q15797 465 aaKnown RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SNAPC1Q16533 368 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 VWA5B1Q5TIE3 1220 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 EGFLAMQ63HQ2 1017 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 BRAT1Q6PJG6 821 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 LRRN1Q6UXK5 716 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 METTL25Q8N6Q8 603 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ANKFN1Q8N957 763 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 RASGEF1AQ8N9B8 481 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 VN1R2Q8NFZ6 395 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 TSEN15Q8WW01 171 aaKnown RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 DNAJA4Q8WW22 397 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 KAT2AQ92830 837 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 MMP27Q9H306 513 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF696Q9H7X3 374 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SCML2Q9UQR0 700 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 STYXL1Q9Y6J8 313 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ABCB7O75027 752 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SLC25A14O95258 325 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 RASAL1O95294 804 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 UGT2B10P36537 528 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 NUDT13Q86X67 352 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SPPL2CQ8IUH8 684 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 KBTBD2Q8IY47 623 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF567Q8N184 647 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ZBTB8BQ8NAP8 495 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 PSD4Q8NDX1 1056 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SLC35B2Q8TB61 432 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 SH3RF2Q8TEC5 729 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 KLHL6Q8WZ60 621 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 UCN3Q969E3 161 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 RGMAQ96B86 450 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 MTFMTQ96DP5 389 aaKnown RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 CNDP2Q96KP4 475 aaKnown RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ADAM33Q9BZ11 813 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 FZD8Q9H461 694 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 VRTNQ9H8Y1 702 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 TMEM248Q9NWD8 314 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 C4AP0C0L4 1744 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 C4BP0C0L5 1744 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 IGLV3-22A0A075B6J6 115 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 DENRO43583 198 aaKnown RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 KDELR3O43731 214 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 ARL6IP5O75915 188 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 TSPAN9O75954 239 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 GOT2P00505 430 aaKnown RBP7.62□□□□□ -1.19
VPS13D-211ENST00000543710 TCN2P20062 427 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 STOMP27105 288 aa7.62□□□□□ -1.19
VPS13D-211ENST00000543710 GSSP48637 474 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms