RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 CCDC138Q96M89 665 aa16.68■□□□□ 0.26
LTBR-210ENST00000542830 TRIM51Q9BSJ1 452 aa16.68■□□□□ 0.26
LTBR-210ENST00000542830 P4HTMQ9NXG6 502 aa16.68■□□□□ 0.26
LTBR-210ENST00000542830 CHMP2BQ9UQN3 213 aa16.68■□□□□ 0.26
LTBR-210ENST00000542830 TEX264Q9Y6I9 313 aa16.68■□□□□ 0.26
LTBR-210ENST00000542830 CCDC88CQ9P219 2028 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 LOC105369274A0A096LPK9 316 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 IGKV1-8A0A0C4DH67 115 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 LOC102723532A0A0G2JNH3 316 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 A6NL46 340 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 EFCAB8A8MWE9 144 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 H0YGG7 62 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 TXNDC9O14530 226 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 NRP2O60462 931 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 DPM1O60762 260 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 AHSGP02765 367 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 UMODP07911 640 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 MMP11P24347 488 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 HRH2P25021 359 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 GABRB3P28472 473 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 IMPA1P29218 277 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 ARF3P61204 181 aaPredicted RBP16.67■□□□□ 0.26
LTBR-210ENST00000542830 YBX1P67809 324 aaKnown RBP16.67■□□□□ 0.26
LTBR-210ENST00000542830 FOXK1P85037 733 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 NKG7Q16617 165 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 DCAF10Q5QP82 559 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 GARNL3Q5VVW2 1013 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 PPP1R32Q7Z5V6 425 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 OR4N4Q8N0Y3 316 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 BBOF1Q8ND07 529 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 EEF1AKMT1Q8WVE0 214 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 RERGQ96A58 199 aaPredicted RBP16.67■□□□□ 0.26
LTBR-210ENST00000542830 VPS50Q96JG6 964 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 CABS1Q96KC9 395 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 PCBD2Q9H0N5 130 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 PARVBQ9HBI1 364 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 ZNF304Q9HCX3 659 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 CCDC177Q9NQR7 707 aaPredicted RBP16.67■□□□□ 0.26
LTBR-210ENST00000542830 CDC14AQ9UNH5 594 aa16.67■□□□□ 0.26
LTBR-210ENST00000542830 HEATR5BQ9P2D3 2071 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 NBASA2RRP1 2371 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 PABPN1LA6NDY0 278 aaKnown RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 AGPSO00116 658 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 PRPF4O43172 522 aaKnown RBP eCLIP16.66■□□□□ 0.26
LTBR-210ENST00000542830 OR1D4P47884 311 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 CDKN2DP55273 166 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 TIAL1Q01085 375 aaKnown RBP eCLIP16.66■□□□□ 0.26
LTBR-210ENST00000542830 PDAP1Q13442 181 aaKnown RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 HP1BP3Q5SSJ5 553 aaPredicted RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 RBM20Q5T481 1227 aaKnown RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 VWA5B1Q5TIE3 1220 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 PAQR3Q6TCH7 311 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 ADCK2Q7Z695 626 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 LRRC56Q8IYG6 542 aaPredicted RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 METTL27Q8N6F8 245 aaPredicted RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 CSNK1A1LQ8N752 337 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 MVB12AQ96EY5 273 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 KRT12Q99456 494 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 SPSB2Q99619 263 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 SMAD5Q99717 465 aaKnown RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 NUDT9Q9BW91 350 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 TRIM31Q9BZY9 425 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 PLAC1Q9HBJ0 212 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 C5AR2Q9P296 337 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 STOX2Q9P2F5 926 aaPredicted RBP16.66■□□□□ 0.26
LTBR-210ENST00000542830 CDC23Q9UJX2 597 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 PDE10AQ9Y233 779 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 MYO18BQ8IUG5 2567 aa16.66■□□□□ 0.26
LTBR-210ENST00000542830 VSTM2BA6NLU5 285 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 ALPPP05187 535 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 HIST1H2AGP0C0S8 130 aaPredicted RBP16.65■□□□□ 0.26
LTBR-210ENST00000542830 HIST1H2ADP20671 130 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 CCND1P24385 295 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 IL2P60568 153 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 TBPL1P62380 186 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 OCA2Q04671 838 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 HECTD2Q5U5R9 776 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 PRAMEF13Q5VWM6 474 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 FAM45BPQ6NSW5 357 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 TRMT10BQ6PF06 316 aaKnown RBP16.65■□□□□ 0.26
LTBR-210ENST00000542830 GALNT16Q8N428 558 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 GPATCH11Q8N954 259 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 FAM45AQ8TCE6 357 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 COL26A1Q96A83 441 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 LINGO1Q96FE5 620 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 HIST1H2AHQ96KK5 128 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 C10orf90Q96M02 699 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 OR2A5Q96R48 311 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 HIST1H2AJQ99878 128 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 WDR83Q9BRX9 315 aaKnown RBP16.65■□□□□ 0.26
LTBR-210ENST00000542830 H2AFJQ9BTM1 129 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 ATP13A2Q9NQ11 1180 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 SEMA3GQ9NS98 782 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 ABCF3Q9NUQ8 709 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 TMEM184CQ9NVA4 438 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 CTSFQ9UBX1 484 aa16.65■□□□□ 0.26
LTBR-210ENST00000542830 ZNF282Q9UDV7 671 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms