RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 B3GALT5Q9Y2C3 310 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 PCDHGA5Q9Y5G8 931 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.07□□□□□ -1.92
USP28-210ENST00000542033 SH3TC1Q8TE82 1336 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 GPRASP1Q5JY77 1395 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 PLEKHH1Q9ULM0 1364 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 CNTLNQ9NXG0 1405 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 ERICH3Q5RHP9 1530 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 BAZ1AQ9NRL2 1556 aaPredicted RBP3.07□□□□□ -1.92
USP28-210ENST00000542033 KIF21BO75037 1637 aa3.07□□□□□ -1.92
USP28-210ENST00000542033 FAM172BPA6NC97 362 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 J3QR06 171 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 DDX39AO00148 427 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 DNM1LO00429 736 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 YKT6O15498 198 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NDUFS4O43181 175 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 SPRY1O43609 319 aaPredicted RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 ZNF217O75362 1048 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CREG1O75629 220 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 SOGA1O94964 1423 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CELF2O95319 508 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 KRT19P08727 400 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 RHOXF2BP0C7M4 288 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 SUPT20HL2P0C7V6 817 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 KRT13P13646 458 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 H2AFXP16104 143 aaPredicted RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 GM2AP17900 193 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 HLA-DPA1P20036 260 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 EPS15P42566 896 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ARCN1P48444 511 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 LIMK1P53667 647 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NAGLUP54802 743 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 BPIFB3P59826 476 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 TUBB4BP68371 445 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 PPP2R2BQ00005 443 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 RBPJQ06330 500 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 RUNX1T1Q06455 604 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 IFFO1Q0D2I5 559 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 HSPB3Q12988 150 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 WDR43Q15061 677 aaKnown RBP eCLIP3.06□□□□□ -1.92
USP28-210ENST00000542033 BCL2A1Q16548 175 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 MEP1BQ16820 701 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 KRT71Q3SY84 523 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ZRANB3Q5FWF4 1079 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CFAP157Q5JU67 520 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 GLRA4Q5JXX5 417 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 C6orf136Q5SQH8 315 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NEPROQ6NW34 567 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 UNC5DQ6UXZ4 953 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 PPP1R21Q6ZMI0 780 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ZNF852Q6ZMS4 543 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 LINC00696Q6ZRV3 163 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 DET1Q7L5Y6 550 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CATSPER4Q7RTX7 472 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 TRMT1LQ7Z2T5 733 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 ATG9AQ7Z3C6 839 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 SPATA19Q7Z5L4 167 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NFE4Q86UQ8 179 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 HOOK3Q86VS8 718 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 LONP2Q86WA8 852 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 PRAG1Q86YV5 1406 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 GRAMD2AQ8IUY3 354 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 TIGD4Q8IY51 512 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 IGSF1Q8N6C5 1336 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CEP112Q8N8E3 955 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NAT8LQ8N9F0 302 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ATAD1Q8NBU5 361 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CCDC112Q8NEF3 446 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NEK11Q8NG66 645 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 EXOC6Q8TAG9 804 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ROBO4Q8WZ75 1007 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 OXNAD1Q96HP4 312 aaPredicted RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 ABHD8Q96I13 439 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 COG3Q96JB2 828 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ZNF558Q96NG5 402 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 LRRC3BQ96PB8 259 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 MS4A10Q96PG2 267 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 UHRF2Q96PU4 802 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 NODALQ96S42 347 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 CCT7Q99832 543 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 RHOXF2Q9BQY4 288 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ABHD6Q9BV23 337 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 MOV10L1Q9BXT6 1211 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 PARD6BQ9BYG5 372 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 PPIL3Q9H2H8 161 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 CENPHQ9H3R5 247 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 PARVBQ9HBI1 364 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 TRPC7Q9HCX4 862 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 IL1RAPL2Q9NP60 686 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 ABCB8Q9NUT2 735 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 FAM118AQ9NWS6 357 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 COQ3Q9NZJ6 369 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 RCC2Q9P258 522 aaKnown RBP3.06□□□□□ -1.92
USP28-210ENST00000542033 CDH7Q9ULB5 785 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 C2CD2Q9Y426 696 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 YIPF1Q9Y548 306 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 TRIM17Q9Y577 477 aa3.06□□□□□ -1.92
USP28-210ENST00000542033 POLA1P09884 1462 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 NPATQ14207 1427 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 MYOM3Q5VTT5 1437 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms