RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	SLC38A9	Q8NBW4	561 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	ATL1	Q8WXF7	558 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	PYCR2	Q96C36	320 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	NDC1	Q9BTX1	674 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	DERL2	Q9GZP9	239 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	STARD5	Q9NSY2	213 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	CUEDC1	Q9NWM3	386 aa	Predicted RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	NDOR1	Q9UHB4	597 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	IL17B	Q9UHF5	180 aa		18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	MRPS18B	Q9Y676	258 aa	Known RBP	18.83	■□□□□ 0.6
ARF3-208	ENST00000541959	HEATR5B	Q9P2D3	2071 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959		A0A087WUV0	522 aa	Predicted RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	NCF1B	A6NI72	391 aa	Predicted RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	NCF1C	A8MVU1	366 aa	Predicted RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	FAM153B	P0C7A2	387 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	NCF1	P14598	390 aa	Predicted RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	GMPR	P36959	345 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	DNASE1L3	Q13609	305 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	FAM153C	Q494X1	144 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	C16orf46	Q6P387	395 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	TLDC1	Q6P9B6	456 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	TBC1D1	Q86TI0	1168 aa	Predicted RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	C17orf64	Q86WR6	236 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	TTC29	Q8NA56	475 aa	Predicted RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	EXT2	Q93063	718 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	FBXL8	Q96CD0	374 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	PAFAH2	Q99487	392 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	ZFYVE21	Q9BQ24	234 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	PLCD4	Q9BRC7	762 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	PCBD2	Q9H0N5	130 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	PCMTD2	Q9NV79	361 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	ANKMY1	Q9P2S6	941 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	DHCR7	Q9UBM7	475 aa	Known RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	SNX7	Q9UNH6	387 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	NOVA2	Q9UNW9	492 aa	Known RBP	18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	AP1M2	Q9Y6Q5	423 aa		18.82	■□□□□ 0.6
ARF3-208	ENST00000541959	SEC16A	O15027	2179 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	OR2A25	A4D2G3	310 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	ZNF891	A8MT65	544 aa	Predicted RBP	18.81	■□□□□ 0.6
ARF3-208	ENST00000541959		H7BY64	318 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	MEN1	O00255	615 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	C1QL1	O75973	258 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	ANXA5	P08758	320 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	PRKAR1A	P10644	381 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	F8A1	P23610	371 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	CCND1	P24385	295 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	CRABP2	P29373	138 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	MSH2	P43246	934 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	PMS2	P54278	862 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	CYP4F2	P78329	520 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	LY6D	Q14210	128 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	ZKSCAN8	Q15776	578 aa	Predicted RBP	18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	TCTE1	Q5JU00	501 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	FRMPD2B	Q6IN97	320 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	TAOK1	Q7L7X3	1001 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	PAQR7	Q86WK9	346 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	PLD3	Q8IV08	490 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	DSEL	Q8IZU8	1212 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	STARD8	Q92502	1023 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	ANKRD7	Q92527	254 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	PRAP1	Q96NZ9	151 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	CHST8	Q9H2A9	424 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	KCND3	Q9UK17	655 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	TLK1	Q9UKI8	766 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	SRPK3	Q9UPE1	567 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	OARD1	Q9Y530	152 aa		18.81	■□□□□ 0.6
ARF3-208	ENST00000541959	IGKV1-8	A0A0C4DH67	115 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	EXOC1L	A0A1B0GW35	172 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	CD1D	P15813	335 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	AGXT	P21549	392 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	ALAS2	P22557	587 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	ATP6V0D1	P61421	351 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	C19orf57	Q0VDD7	668 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	PPP1R3A	Q16821	1122 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	WASHC2D	Q5SRD0	308 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	TTLL10	Q6ZVT0	673 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	RNF44	Q7L0R7	432 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	SLC44A1	Q8WWI5	657 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	SLC45A3	Q96JT2	553 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	RUFY1	Q96T51	708 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	SNX15	Q9NRS6	342 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	RNF112	Q9ULX5	631 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	SH2B3	Q9UQQ2	575 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	KLK4	Q9Y5K2	254 aa		18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	TLN1	Q9Y490	2541 aa	Known RBP	18.8	■□□□□ 0.6
ARF3-208	ENST00000541959	ZNF462	Q96JM2	2506 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	LOC105369274	A0A096LPK9	316 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	LOC102723532	A0A0G2JNH3	316 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	HAT1	O14929	419 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	WISP3	O95389	354 aa	Predicted RBP	18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	S100B	P04271	92 aa	Predicted RBP	18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	ITGB2	P05107	769 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	SLC35E2B	P0CK96	405 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	CDH1	P12830	882 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	TYK2	P29597	1187 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	SERPINB8	P50452	374 aa		18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	RPS15	P62841	145 aa	Known RBP	18.79	■□□□□ 0.6
ARF3-208	ENST00000541959	GRM7	Q14831	915 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms