RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
PHACTR3-209ENST00000541461 COL4A6Q14031 1691 aa10.24□□□□□ -0.77
PHACTR3-209ENST00000541461 OR2A25A4D2G3 310 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 WNT9AO14904 365 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 CCNDBP1O95273 360 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 CD160O95971 181 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 EBLN1P0CF75 366 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 HOXB9P17482 250 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 MAGP20916 626 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SERPINB1P30740 379 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 LIPAP38571 399 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SLC11A1P49279 550 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 CLDN8P56748 225 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ABHD18Q0P651 414 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 FAM171A1Q5VUB5 890 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 RNF219Q5W0B1 726 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 PRSS48Q7RTY5 328 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 BCL7CQ8WUZ0 217 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 USP7Q93009 1102 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 NTMT1Q9BV86 223 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 MIR1-1HGQ9H1L0 117 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 DCSTAMPQ9H295 470 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ASIC5Q9NY37 505 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 TRPS1Q9UHF7 1281 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 VPS4AQ9UN37 437 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SAMD4AQ9UPU9 718 aaKnown RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 MAN2B2Q9Y2E5 1009 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 PCDHB1Q9Y5F3 818 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 HSPE1-MOB4S4R3N1 261 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 TBX1O43435 398 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 PCDHGA12O60330 932 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 UPK1BO75841 260 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 WDR47O94967 919 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 GJB5O95377 273 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 VNN2O95498 520 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 PRAMEF1O95521 474 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SPNP16150 400 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 EPB42P16452 691 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ZNF7P17097 686 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 DNAJA1P31689 397 aaKnown RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 GSSP48637 474 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 RGS4P49798 205 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 RPP38P78345 283 aaKnown RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ARF5P84085 180 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ZNF177Q13360 481 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ARHGEF7Q14155 803 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 PLEKHG6Q3KR16 790 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SPOUT1Q5T280 376 aaKnown RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ATXN7L2Q5T6C5 722 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 OR4F3Q6IEY1 312 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 NCEH1Q6PIU2 408 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 RSPO2Q6UXX9 243 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 Q6ZPB1 254 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 TSPYL5Q86VY4 417 aaPredicted RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 HORMAD1Q86X24 394 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ATG16L2Q8NAA4 619 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 APH1BQ8WW43 257 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 DNASE1L2Q92874 299 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SPOCK3Q9BQ16 436 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 AASDHPPTQ9NRN7 309 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 KRT84Q9NSB2 600 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 KIF17Q9P2E2 1029 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 ERVW-1Q9UQF0 538 aa10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 SAMHD1Q9Y3Z3 626 aaKnown RBP10.23□□□□□ -0.77
PHACTR3-209ENST00000541461 UNC80Q8N2C7 3258 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 CLDN24A6NM45 220 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 UPK3BL1B0FP48 263 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 UPK3BL2E5RIL1 263 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 GAPDHSO14556 408 aaPredicted RBP10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 RFXANKO14593 260 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 FKBP9O95302 570 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 PGLSO95336 258 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 KLKB1P03952 638 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 FABP3P05413 133 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 GALTP07902 379 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 FPR1P21462 350 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 DGKAP23743 735 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 CLK1P49759 484 aaKnown RBP10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 NKX2-5P52952 324 aaPredicted RBP10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 MVKQ03426 396 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 DUSP4Q13115 394 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 FADDQ13158 208 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 SF3B4Q15427 424 aaKnown RBP eCLIP10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 C9orf50Q5SZB4 431 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 ATAD3BQ5T9A4 648 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 DEPDC1Q5TB30 811 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 KIAA1614Q5VZ46 1190 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 STEAP3Q658P3 488 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 TAS1R1Q7RTX1 841 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 CHCHD4Q8N4Q1 142 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 POC5Q8NA72 575 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 FAM83FQ8NEG4 500 aaPredicted RBP10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 HERVK_113Q902F9 699 aa10.22□□□□□ -0.77
PHACTR3-209ENST00000541461 CEP295NLQ96MC4 621 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms