RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ENO2P09104 434 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 AGXTP21549 392 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ALAS2P22557 587 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 CCND1P24385 295 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 PTPN4P29074 926 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 GMPRP36959 345 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 RAB10P61026 200 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 RPS18P62269 152 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 RPS15P62841 145 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 RHDQ02161 417 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 BMPR2Q13873 1038 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 GRM7Q14831 915 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 TSNQ15631 228 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ZKSCAN8Q15776 578 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 PPP1R3AQ16821 1122 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 TCTE1Q5JU00 501 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 WASHC2DQ5SRD0 308 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 TEX35Q5T0J7 233 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 MROH9Q5TGP6 573 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 CAPN13Q6MZZ7 669 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 RHBDD2Q6NTF9 364 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 FBXO42Q6P3S6 717 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF517Q6ZMY9 492 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 FRA10AC1Q70Z53 315 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 RNF44Q7L0R7 432 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 CMC1Q7Z7K0 106 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 PAQR7Q86WK9 346 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 C17orf64Q86WR6 236 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 OR4N4Q8N0Y3 316 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 UHMK1Q8TAS1 419 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ATL1Q8WXF7 558 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ANKRD7Q92527 254 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 PYCR2Q96C36 320 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 FBXL8Q96CD0 374 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 PRAP1Q96NZ9 151 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 EGFL8Q99944 293 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ZFYVE21Q9BQ24 234 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 SGPP1Q9BX95 441 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 GPR87Q9BY21 358 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 DERL2Q9GZP9 239 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 PCBD2Q9H0N5 130 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ACTL8Q9H568 366 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ACSS3Q9H6R3 686 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 L2HGDHQ9H9P8 463 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 CUEDC1Q9NWM3 386 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 ANKMY1Q9P2S6 941 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 SNX7Q9UNH6 387 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 NOVA2Q9UNW9 492 aaKnown RBP8.84□□□□□ -0.99
SNHG1-215ENST00000540904 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
SNHG1-215ENST00000540904 LAMA5O15230 3695 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 NCF1BA6NI72 391 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 NCF1CA8MVU1 366 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 C9J4A7 227 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 H0YGG7 62 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 HAT1O14929 419 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 SRPX2O60687 465 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 WISP3O95389 354 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 ANXA5P08758 320 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 FAM153BP0C7A2 387 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 SLC35E2BP0CK96 405 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 CDH1P12830 882 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 NCF1P14598 390 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 EZRP15311 586 aaKnown RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 CRABP2P29373 138 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 ARSFP54793 590 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 ARF3P61204 181 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 DCDP81605 110 aaKnown RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 NFKB2Q00653 900 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 MC1RQ01726 317 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 CDC20Q12834 499 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 ERV3-1Q14264 604 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 CSHL1Q14406 222 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 ZXDCQ2QGD7 858 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 FAM153CQ494X1 144 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 NKAIN1Q4KMZ8 207 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 TAF1BQ53T94 588 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 ATP1A1-AS1Q5TC04 95 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 ZNF425Q6IV72 752 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 FAM198BQ6UWH4 519 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 TTLL10Q6ZVT0 673 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 ADAMTSL2Q86TH1 951 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 TBC1D1Q86TI0 1168 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 PLD3Q8IV08 490 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 TTC29Q8NA56 475 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 PROKR1Q8TCW9 393 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 TTC9Q92623 222 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 EXTL1Q92935 676 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 RERGQ96A58 199 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 GBP5Q96PP8 586 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 UBL7Q96S82 380 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 DPH2Q9BQC3 489 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 HAUS8Q9BT25 410 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 CUTCQ9NTM9 273 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 IFT80Q9P2H3 777 aaPredicted RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 NDOR1Q9UHB4 597 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 SH2B3Q9UQQ2 575 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 FARSAQ9Y285 508 aaKnown RBP8.83□□□□□ -1
SNHG1-215ENST00000540904 OARD1Q9Y530 152 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 PCDHGA6Q9Y5G7 932 aa8.83□□□□□ -1
SNHG1-215ENST00000540904 IKBKGQ9Y6K9 419 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms