RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 NPTX1Q15818 432 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 HSD11B1LQ7Z5J1 315 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 B3GNT8Q7Z7M8 397 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 IGFN1Q86VF2 1251 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ABHD11Q8NFV4 315 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 RMND5AQ9H871 391 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SPTBN5Q9NRC6 3674 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ATG2BQ96BY7 2078 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CFAP99D6REC4 459 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 NDUFS2O75306 463 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 MT-ND2P03891 347 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 C7P10643 843 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 RPS3P23396 243 aaKnown RBP eCLIP13.24□□□□□ -0.293e-8■■■□□ 17.1
BNIP3-202ENST00000540159 PTPN6P29350 595 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CLK3P49761 638 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF829Q3KNS6 432 aaPredicted RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 C22orf39Q6P5X5 142 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF852Q6ZMS4 543 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SLC16A12Q6ZSM3 486 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CRIPAKQ8N1N5 446 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 C1orf52Q8N6N3 182 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ZFP90Q8TF47 636 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 BORCS5Q969J3 196 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SCRN2Q96FV2 425 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 SH3GL1Q99961 368 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 WRAP53Q9BUR4 548 aaKnown RBP13.24□□□□□ -0.29
BNIP3-202ENST00000540159 ACAT2Q9BWD1 397 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 MIR1-1HGQ9H1L0 117 aa13.24□□□□□ -0.29
BNIP3-202ENST00000540159 CHD9Q3L8U1 2897 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 TRBV5-4A0A0C4DH59 114 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 PLK4O00444 970 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 TSPAN6O43657 245 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 RFPL2O75678 378 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 AMD1P17707 334 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 CCR2P41597 374 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 MASP1P48740 699 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 MC1RQ01726 317 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 MVKQ03426 396 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF554Q86TJ5 538 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 SLC44A2Q8IWA5 706 aaPredicted RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 TTC29Q8NA56 475 aaPredicted RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 LEMD2Q8NC56 503 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 GLB1L3Q8NCI6 653 aaPredicted RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 CCDC115Q96NT0 180 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 RIOK2Q9BVS4 552 aaKnown RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 ROGDIQ9GZN7 287 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 GON4LQ3T8J9 2241 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 TRBV5-3A0A0A0MS03 114 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 LEFTY2O00292 366 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 HOXA2O43364 376 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 FAM20BO75063 409 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 CLPXO76031 633 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 EPN2O95208 641 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 ATP1B2P14415 290 aaPredicted RBP13.23□□□□□ -0.29
BNIP3-202ENST00000540159 CD9P21926 228 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 PSMA3P25788 255 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 METAP1P53582 386 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 ACSM2AQ08AH3 577 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 STARD3Q14849 445 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 ZNF691Q5VV52 312 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 ACSM2BQ68CK6 577 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 GTF2IRD2BQ6EKJ0 949 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 GTF2IRD2Q86UP8 949 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 CHPFQ8IZ52 775 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 RAB2BQ8WUD1 216 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 RORBQ92753 470 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 DOK1Q99704 481 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 DNAJC11Q9NVH1 559 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 CDH7Q9ULB5 785 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 PRKAB1Q9Y478 270 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 BACE2Q9Y5Z0 518 aa13.23□□□□□ -0.29
BNIP3-202ENST00000540159 A0A096LPI6 279 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 TGM5O43548 720 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 ERN1O75460 977 aaKnown RBP13.22□□□□□ -0.29
BNIP3-202ENST00000540159 RECQL5O94762 991 aaPredicted RBP13.22□□□□□ -0.29
BNIP3-202ENST00000540159 SLC16A8O95907 504 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 GSTM2P28161 218 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 TTKP33981 857 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 CRATP43155 626 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 IDH2P48735 452 aaKnown RBP13.22□□□□□ -0.29
BNIP3-202ENST00000540159 TLE2Q04725 743 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 DOC2AQ14183 400 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 SPATS1Q496A3 300 aa13.22□□□□□ -0.29
BNIP3-202ENST00000540159 SOWAHCQ53LP3 525 aaPredicted RBP13.22□□□□□ -0.29
BNIP3-202ENST00000540159 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms