RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 EHD3Q9NZN3 535 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 UGT2A1Q9Y4X1 527 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 HSPE1-MOB4S4R3N1 261 aa13.52□□□□□ -0.24
SCNN1A-215ENST00000540037 GFRA2O00451 464 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 HOXC8P31273 242 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 KDELR2P33947 212 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 CRYBA2P53672 197 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF621Q6ZSS3 439 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 PTOV1Q86YD1 416 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 ADGRG2Q8IZP9 1017 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 CLECL1Q8IZS7 167 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF675Q8TD23 568 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 APOLD1Q96LR9 279 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 FAM126AQ9BYI3 521 aaPredicted RBP13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 GABRQQ9UN88 632 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 ERVW-1Q9UQF0 538 aa13.52□□□□□ -0.25
SCNN1A-215ENST00000540037 CLIC1O00299 241 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 YY2O15391 372 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 KRT75O95678 551 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 PTTG1O95997 202 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 IGLV3-27P01718 113 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 S100A5P33763 92 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 THPOP40225 353 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 DGKEP52429 567 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 ATAD3CQ5T2N8 411 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 SLC46A3Q7Z3Q1 461 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 ZZZ3Q8IYH5 903 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 CYP4Z2PQ8N1L4 340 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 SELENOMQ8WWX9 145 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 SEPT5Q99719 369 aaPredicted RBP13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 REEP1Q9H902 201 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 TMA7Q9Y2S6 64 aaKnown RBP13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 OARD1Q9Y530 152 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 SAGE2PA6NJ88 616 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 HOXC11O43248 304 aaPredicted RBP13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 IDH3BO43837 385 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 CPSF4O95639 269 aaKnown RBP13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 SEMG1P04279 462 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 EPB42P16452 691 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 IL1RNP18510 177 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 CLDN8P56748 225 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 TUBA1BP68363 451 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 IRF3Q14653 427 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 VMACQ2NL98 169 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 CYP27C1Q4G0S4 372 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 TUBA1AQ71U36 451 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 AMER2Q8N7J2 671 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 LILRB4Q8NHJ6 448 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 USP7Q93009 1102 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 PANX1Q96RD7 426 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 GPR63Q9BZJ6 419 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 CLPBQ9H078 707 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 IL17CQ9P0M4 197 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 PSORS1C1Q9UIG5 152 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 MAN2B2Q9Y2E5 1009 aa13.51□□□□□ -0.25
SCNN1A-215ENST00000540037 H3BNC9 293 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 PRAMEF1O95521 474 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 CXCR2P25025 360 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 RRM2P31350 389 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 UGT2B10P36537 528 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 IQCCQ4KMZ1 466 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 DENND1CQ8IV53 801 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 IPCEF1Q8WWN9 437 aaPredicted RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 PLSCR3Q9NRY6 295 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 DDX28Q9NUL7 540 aaKnown RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 A0A0U1RQF3 1178 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 ADORA3P0DMS8 318 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 CD9P21926 228 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 ZMAT1Q5H9K5 638 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 ARMCX4Q5H9R4 360 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 ZNF648Q5T619 568 aaPredicted RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 FAHD1Q6P587 224 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 NRARPQ7Z6K4 114 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 FAM124AQ86V42 546 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 BEND7Q8N7W2 519 aaPredicted RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 HRASLS5Q96KN8 279 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 CDK5RAP1Q96SZ6 601 aaKnown RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 FEVQ99581 238 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 PTPN18Q99952 460 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 NUAK2Q9H093 628 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 RNF38Q9H0F5 515 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 TBC1D14Q9P2M4 693 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 MICAL3Q7RTP6 2002 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 GAPDHSO14556 408 aaPredicted RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 FPGTO14772 594 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 CD160O95971 181 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 OPN1SWP03999 348 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 RPLP0P05388 317 aaKnown RBP13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 KRT8P05787 483 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 POU2F1P14859 743 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 GKP32189 559 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 OR1G1P47890 313 aa13.5□□□□□ -0.25
SCNN1A-215ENST00000540037 OR2B6P58173 313 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms