RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 HCFC1R1Q9NWW0 138 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 NPIPB8E9PQR5 432 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 FGF18O76093 207 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 CPSF4O95639 269 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 FTH1P02794 183 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 CYP2A6P11509 494 aaPredicted RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 ACPPP15309 386 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 PCSK2P16519 638 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ZNF182P17025 639 aaPredicted RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 ZNF30P17039 623 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ENGP17813 658 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ETV3P41162 512 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 CCR2P41597 374 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ISL1P61371 349 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 IL1RL1Q01638 556 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 NFATC3Q12968 1075 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 BNIP3Q12983 259 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 MTAPQ13126 283 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 UGT8Q16880 541 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 RFX4Q33E94 735 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ZNF691Q5VV52 312 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 LIPJQ5W064 366 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 CPZQ66K79 652 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ELMSAN1Q6PJG2 1045 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 BRAT1Q6PJG6 821 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 GALNT5Q7Z7M9 940 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 KREMEN2Q8NCW0 462 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 FBXL8Q96CD0 374 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 MED8Q96G25 268 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 VNN3Q9NY84 501 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 VPS29Q9UBQ0 182 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 MTCL1Q9Y4B5 1905 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 SERTM1A2A2V5 107 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 TMEM202A6NGA9 273 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 MYO1GB0I1T2 1018 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 PTGES3LE9PB15 166 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 EPN2O95208 641 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 CTSAP10619 480 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 CD22P20273 847 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 IGFBP5P24593 272 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 VIPR1P32241 457 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 TRPC1P48995 793 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 GABARAPL2P60520 117 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 SRSF11Q05519 484 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 CSTF3Q12996 717 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 SF1Q15637 639 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 SYTL3Q4VX76 610 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 SHQ1Q6PI26 577 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 XKR5Q6UX68 686 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 NEK10Q6ZWH5 1172 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 GALNT10Q86SR1 603 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 THOC6Q86W42 341 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 ZC3H7AQ8IWR0 971 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 TBC1D15Q8TC07 691 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 TOX2Q96NM4 488 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 DGCR6LQ9BY27 220 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 WARS2Q9UGM6 360 aaKnown RBP12.75□□□□□ -0.37
LDLR-203ENST00000535915 TBX21Q9UL17 535 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 ABCG2Q9UNQ0 655 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 SNX5Q9Y5X3 404 aa12.75□□□□□ -0.37
LDLR-203ENST00000535915 PCM1Q15154 2024 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 TRIM64BA6NI03 449 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 MAGEB17A8MXT2 336 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 E7EQ34 232 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 SLC1A7O00341 560 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 BCKDKO14874 412 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 SGTAO43765 313 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 MITFO75030 526 aaPredicted RBP12.74□□□□□ -0.37
LDLR-203ENST00000535915 HTR1AP08908 422 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 GSTM1P09488 218 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 TYRP14679 529 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 MAGEA2P43356 314 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 CD97P48960 835 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 ARHGDIAP52565 204 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 PLA2G16P53816 162 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 IL5RAQ01344 420 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 GSTM4Q03013 218 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 TOP3AQ13472 1001 aaPredicted RBP12.74□□□□□ -0.37
LDLR-203ENST00000535915 CCDC92Q53HC0 331 aaPredicted RBP12.74□□□□□ -0.37
LDLR-203ENST00000535915 ANKRD26P1Q6NSI1 321 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 CHPFQ8IZ52 775 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 RAB2BQ8WUD1 216 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 SLC35B4Q969S0 331 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 SLX1AQ9BQ83 275 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 RIOK2Q9BVS4 552 aaKnown RBP12.74□□□□□ -0.37
LDLR-203ENST00000535915 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 ARHGEF33A8MVX0 844 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 LEFTY1O75610 366 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 SLCO2B1O94956 709 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 CXCL14O95715 111 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 WDR5P61964 334 aaKnown RBP12.74□□□□□ -0.37
LDLR-203ENST00000535915 ACSM2AQ08AH3 577 aa12.74□□□□□ -0.37
LDLR-203ENST00000535915 KCNC3Q14003 757 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms