RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PWWP2AQ96N64 755 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 IP6K3Q96PC2 410 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 NDNQ99608 321 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 SPSB2Q99619 263 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 NAPGQ99747 312 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-215ENST00000534307 ZFYVE21Q9BQ24 234 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 NUDT9Q9BW91 350 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 ACAT2Q9BWD1 397 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 NDOR1Q9UHB4 597 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 GPN3Q9UHW5 284 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-215ENST00000534307 TEX264Q9Y6I9 313 aa13.44□□□□□ -0.26
SF3B2-215ENST00000534307 A0A0J9YVX5 310 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 VPS26AO75436 327 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 ALAS2P22557 587 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 IMPA1P29218 277 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 CMPK1P30085 196 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 CDKN2DP55273 166 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 VSX2P58304 361 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-215ENST00000534307 PRDX1Q06830 199 aaKnown RBP13.43□□□□□ -0.26
SF3B2-215ENST00000534307 NKG7Q16617 165 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 FAM214AQ32MH5 1076 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 BBS9Q3SYG4 887 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 ICE2Q659A1 982 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 STEAP4Q687X5 459 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 KIAA0408Q6ZU52 694 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 KLHL7Q8IXQ5 586 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 ARHGEF39Q8N4T4 335 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 PPFIBP2Q8ND30 876 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 NACC2Q96BF6 587 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 PTERQ96BW5 349 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 C10orf90Q96M02 699 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 RUNDC3BQ96NL0 473 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 TRIM51Q9BSJ1 452 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 MRPS30Q9NP92 439 aaKnown RBP13.43□□□□□ -0.26
SF3B2-215ENST00000534307 SLC17A6Q9P2U8 582 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 PCDHGB7Q9Y5F8 929 aa13.43□□□□□ -0.26
SF3B2-215ENST00000534307 MDC1Q14676 2089 aaKnown RBP13.43□□□□□ -0.26
SF3B2-215ENST00000534307 HYKKA2RU49 373 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 VSTM2BA6NLU5 285 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 H0YGG7 62 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 CCDC188H7C350 402 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 SMAPO00193 183 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TTI1O43156 1089 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 SEC31AO94979 1220 aaKnown RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TSPAN12O95859 305 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 AHSGP02765 367 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 RPA3P35244 121 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 ELK3P41970 407 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 EMP3P54852 163 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 ARF3P61204 181 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 RELAQ04206 551 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 CBLBQ13191 982 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 FRG1Q14331 258 aaKnown RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 DCAF10Q5QP82 559 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 RBM20Q5T481 1227 aaKnown RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TEDDM1Q5T9Z0 273 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 LRRC8EQ6NSJ5 796 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TRMT10BQ6PF06 316 aaKnown RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 UBE2R2Q712K3 238 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 PDIK1LQ8N165 341 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TTC29Q8NA56 475 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 EEF1AKMT1Q8WVE0 214 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 MIB2Q96AX9 1013 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 LRRC39Q96DD0 335 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 OR2A5Q96R48 311 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 P4HTMQ9NXG6 502 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TAS2R13Q9NYV9 303 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TAC3Q9UHF0 121 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 TRMT6Q9UJA5 497 aaKnown RBP13.42□□□□□ -0.26
SF3B2-215ENST00000534307 ADAMTS6Q9UKP5 1117 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 ZNF451Q9Y4E5 1061 aa13.42□□□□□ -0.26
SF3B2-215ENST00000534307 A6NL46 340 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 ZBTB14O43829 449 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 SORBS2O94875 1100 aaKnown RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 CCNDBP1O95273 360 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 PIM1P11309 404 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 EZRP15311 586 aaKnown RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 MMP11P24347 488 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 OR1D4P47884 311 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 CD97P48960 835 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 CARSP49589 748 aaKnown RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 ITGA8P53708 1063 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 SOX8P57073 446 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 ABATP80404 500 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 HIF1AQ16665 826 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 HP1BP3Q5SSJ5 553 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 UGT3A1Q6NUS8 523 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 PAQR3Q6TCH7 311 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 METTL27Q8N6F8 245 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 GABPB2Q8TAK5 448 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-215ENST00000534307 FER1L6-AS2Q96M78 137 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 GPR83Q9NYM4 423 aa13.41□□□□□ -0.26
SF3B2-215ENST00000534307 STOX2Q9P2F5 926 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms