RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 C1orf105O95561 183 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 STATHP02808 62 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 CMPK1P30085 196 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
COPB1-209ENST00000533096 PPARGP37231 505 aaPredicted RBP12.37□□□□□ -0.43
COPB1-209ENST00000533096 HADHBP55084 474 aaKnown RBP12.37□□□□□ -0.43
COPB1-209ENST00000533096 RWDD2BP57060 319 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 PRAMEP78395 509 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 SPA17Q15506 151 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 BTBD16Q32M84 506 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 TSTD2Q5T7W7 516 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 AFTPHQ6ULP2 937 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 SUSD1Q6UWL2 747 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 RIPOR1Q6ZS17 1223 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 LINC00523Q86TU6 105 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 CDH24Q86UP0 819 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 CSNK1A1LQ8N752 337 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 C10orf90Q96M02 699 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 ZFYVE21Q9BQ24 234 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 TMEM121Q9BTD3 319 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 RAB11FIP5Q9BXF6 653 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 HES7Q9BYE0 225 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 ZNF700Q9H0M5 742 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 GPAMQ9HCL2 828 aa12.37□□□□□ -0.43
COPB1-209ENST00000533096 RUVBL1Q9Y265 456 aaKnown RBP12.37□□□□□ -0.43
COPB1-209ENST00000533096 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 OR2W5A6NFC9 320 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 PRPF4O43172 522 aaKnown RBP eCLIP12.36□□□□□ -0.436e-8■■■■■ 28.1
COPB1-209ENST00000533096 SLCO2B1O94956 709 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 CAPN3P20807 821 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 CD96P40200 585 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 GRIA1P42261 906 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 GDF10P55107 478 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 OC90Q02509 493 aaPredicted RBP12.36□□□□□ -0.43
COPB1-209ENST00000533096 DSG2Q14126 1118 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 PCOLCEQ15113 449 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 PRTGQ2VWP7 1150 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 C11orf63Q6NUN7 778 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
COPB1-209ENST00000533096 ZNF534Q76KX8 674 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 OTOAQ7RTW8 1153 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 FOPNLQ96NB1 174 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 MRPS30Q9NP92 439 aaKnown RBP12.36□□□□□ -0.43
COPB1-209ENST00000533096 MKKSQ9NPJ1 570 aaPredicted RBP12.36□□□□□ -0.43
COPB1-209ENST00000533096 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 MEMO1Q9Y316 297 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 DUSP10Q9Y6W6 482 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 SEC16AO15027 2179 aa12.36□□□□□ -0.43
COPB1-209ENST00000533096 IGLV3-12A0A075B6K2 115 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 A0A0U1RQJ8 604 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 E7EVH7 732 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 NDUFS3O75489 264 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 FKBP9O95302 570 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 C8orf89P0DMQ9 161 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ABOP16442 354 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ADRA1DP25100 572 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 EEF1DP29692 281 aaKnown RBP12.35□□□□□ -0.43
COPB1-209ENST00000533096 RPA3P35244 121 aaPredicted RBP12.35□□□□□ -0.43
COPB1-209ENST00000533096 SLC26A3P40879 764 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 CSNK1G2P78368 415 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 HSF1Q00613 529 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ACTN3Q08043 901 aaPredicted RBP12.35□□□□□ -0.43
COPB1-209ENST00000533096 CDH17Q12864 832 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 P3H1Q32P28 736 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 MINDY4Q4G0A6 757 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 KRTCAP3Q53RY4 240 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 RNF44Q7L0R7 432 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ADCK2Q7Z695 626 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
COPB1-209ENST00000533096 PLD3Q8IV08 490 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 KLHDC8BQ8IXV7 354 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 AMER3Q8N944 861 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 RERGQ96A58 199 aaPredicted RBP12.35□□□□□ -0.43
COPB1-209ENST00000533096 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 IMMP1LQ96LU5 166 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ZNF354BQ96LW1 612 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 GPR137Q96N19 417 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 CYTH2Q99418 400 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 TUBB6Q9BUF5 446 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 RNF32Q9H0A6 362 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 ETNK1Q9HBU6 452 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 MARCH4Q9P2E8 410 aaPredicted RBP12.35□□□□□ -0.43
COPB1-209ENST00000533096 POLQO75417 2590 aa12.35□□□□□ -0.43
COPB1-209ENST00000533096 PDZD2O15018 2839 aa12.34□□□□□ -0.43
COPB1-209ENST00000533096 APCP25054 2843 aa12.34□□□□□ -0.43
COPB1-209ENST00000533096 DIDO1Q9BTC0 2240 aaKnown RBP12.34□□□□□ -0.43
COPB1-209ENST00000533096 LOC102723996A0A087X1L8 192 aa12.34□□□□□ -0.43
COPB1-209ENST00000533096 A0A1W2PPV9 198 aa12.34□□□□□ -0.43
COPB1-209ENST00000533096 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms