RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ZNF761Q86XN6 746 aaPredicted RBP12.06□□□□□ -0.48
COPB1-208ENST00000532088 CACTIN-AS1Q8N1I8 211 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 OR4D9Q8NGE8 314 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 OR2A1Q8NGT9 310 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 RAB3IL1Q8TBN0 382 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 RSC1A1Q92681 617 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 OR2A14Q96R47 310 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 RTKNQ9BST9 563 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 PITPNM3Q9BZ71 974 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 ATG10Q9H0Y0 220 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 EHD1Q9H4M9 534 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 C1GALT1Q9NS00 363 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 DNAJC11Q9NVH1 559 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 INTS7Q9NVH2 962 aaKnown RBP12.06□□□□□ -0.48
COPB1-208ENST00000532088 OPTCQ9UBM4 332 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 STK38LQ9Y2H1 464 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 KCNE2Q9Y6J6 123 aa12.06□□□□□ -0.48
COPB1-208ENST00000532088 EP300Q09472 2414 aaPredicted RBP12.06□□□□□ -0.48
COPB1-208ENST00000532088 GSAPA4D1B5 854 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 KRT87PA6NCN2 255 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 TLCD2A6NGC4 264 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 ISM1B1AKI9 464 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 E2F3O00716 465 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 WDR47O94967 919 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 MLYCDO95822 493 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 RPLP0P05388 317 aaKnown RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 ANKRD34CP0C6C1 535 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 UGT2B7P16662 529 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 NPPBP16860 134 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 TYRP1P17643 537 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 POLR2CP19387 275 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 MSX1P28360 303 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 EEF1DP29692 281 aaKnown RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 PRDX3P30048 256 aaKnown RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 CMPK1P30085 196 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 ALDH3A1P30838 453 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 HPDP32754 393 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 PLA2G5P39877 138 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 CCL7P80098 99 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 CDC16Q13042 620 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 TRA2AQ13595 282 aaKnown RBP eCLIP12.05□□□□□ -0.48
COPB1-208ENST00000532088 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 PRSS42Q7Z5A4 293 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 C17orf64Q86WR6 236 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 KMT5CQ86Y97 462 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 TRIM42Q8IWZ5 723 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 Q8N9G6 341 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 PPFIBP2Q8ND30 876 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 DEFB124Q8NES8 71 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 OR6Y1Q8NGX8 325 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 ZNF483Q8TF39 744 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 JPH3Q8WXH2 748 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 ZUFSPQ96AP4 578 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 ZBTB9Q96C00 473 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 GRAMD1AQ96CP6 724 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 FAM122AQ96E09 287 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 PHF21BQ96EK2 531 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 MED8Q96G25 268 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 MAGEB10Q96LZ2 347 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 TMEM237Q96Q45 408 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 OR4K3Q96R72 315 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 GFM1Q96RP9 751 aaKnown RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 SELENOSQ9BQE4 189 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 TRMOQ9BU70 441 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 PITHD1Q9GZP4 211 aaPredicted RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 ABCG4Q9H172 646 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 C12orf65Q9H3J6 166 aaKnown RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 SPHK1Q9NYA1 384 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 CIDEBQ9UHD4 219 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 PCTPQ9UKL6 214 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 APOBEC2Q9Y235 224 aaKnown RBP12.05□□□□□ -0.48
COPB1-208ENST00000532088 SLC22A14Q9Y267 594 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 LAMA1P25391 3075 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 FAM186AA6NE01 2351 aa12.05□□□□□ -0.48
COPB1-208ENST00000532088 A0A0J9YY10 115 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 D6RAR5 112 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 TMX2-CTNND1H3BSU7 103 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 NPHS1O60500 1241 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 UGDHO60701 494 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 EPB42P16452 691 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 GNAZP19086 355 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 CSF2RBP32927 897 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 CASP2P42575 452 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 AGTR2P50052 363 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 SPIDRQ14159 915 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 TBCCQ15814 346 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 PDK4Q16654 411 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 UNC50Q53HI1 259 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 THEMIS2Q5TEJ8 643 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 ICE2Q659A1 982 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 SUSD1Q6UWL2 747 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 NUDCD3Q8IVD9 361 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 C10orf107Q8IVU9 208 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 CHCHD4Q8N4Q1 142 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 ANKRD42Q8N9B4 389 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 ABHD11Q8NFV4 315 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 OR2L3Q8NG85 312 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 SLC5A11Q8WWX8 675 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 NCSTNQ92542 709 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms