RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MUM1Q2TAK8 710 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 PRTGQ2VWP7 1150 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 RPUSD3Q6P087 351 aaKnown RBP17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 SUSD1Q6UWL2 747 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 CES3Q6UWW8 571 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 NDUFAF7Q7L592 441 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 LRRC6Q86X45 466 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 SLC34A3Q8N130 599 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 FOPNLQ96NB1 174 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 BIRC8Q96P09 236 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 TAAR6Q96RI8 345 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 TRIM56Q9BRZ2 755 aaKnown RBP17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 YIPF2Q9BWQ6 316 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 FRMD8P1Q9BZ68 369 aaPredicted RBP17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 SPATA7Q9P0W8 599 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 TRPC4Q9UBN4 977 aa17.54■□□□□ 0.4
SSSCA1-206ENST00000531405 PKDREJQ9NTG1 2253 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 IGLV3-12A0A075B6K2 115 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 IDSB3KWA1 339 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 USP1O94782 785 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 STSP08842 583 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 ARNTP27540 789 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 CMPK1P30085 196 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 FMO4P31512 558 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 SOX11P35716 441 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 EMP2P54851 167 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 SRSF11Q05519 484 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 TSTA3Q13630 321 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 HKDC1Q2TB90 917 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 ZNF324BQ6AW86 544 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 MPP5Q8N3R9 675 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 UNKQ9C0B0 810 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 RBSNQ9H1K0 784 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 GALPQ9UBC7 116 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 RUVBL1Q9Y265 456 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 MRFAP1Q9Y605 127 aa17.53■□□□□ 0.4
SSSCA1-206ENST00000531405 IGKV1-8A0A0C4DH67 115 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 DYTNA2CJ06 578 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 ARHGEF33A8MVX0 844 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 HNRNPRO43390 633 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 VAPBO95292 243 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 MATN4O95460 622 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 MGAT1P26572 445 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 TNFSF10P50591 281 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 TDGF1P3P51864 188 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 BASP1P80723 227 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 DSG2Q14126 1118 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 GBX1Q14549 363 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 SP5Q6BEB4 398 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 SPNS2Q8IVW8 549 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 CSNK1A1LQ8N752 337 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 AMER3Q8N944 861 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 MAGEC3Q8TD91 643 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 LPGAT1Q92604 370 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 MFSD3Q96ES6 412 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 PLCD4Q9BRC7 762 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 IL22Q9GZX6 179 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 MRPS30Q9NP92 439 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 SYBUQ9NX95 663 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 ENTPD4Q9Y227 616 aa17.52■□□□□ 0.4
SSSCA1-206ENST00000531405 IGHV1-45A0A0A0MS14 117 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 A0A1B0GUH1 482 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 PRSS44E7EML9 344 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 SERPINA7P05543 415 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 UQCRHP07919 91 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 ERGP11308 486 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 CXCR2P25025 360 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 RPA3P35244 121 aaPredicted RBP17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 EFNA3P52797 238 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 SIX1Q15475 284 aaPredicted RBP17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 SYT16Q17RD7 645 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 ACSBG2Q5FVE4 666 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 PAQR7Q86WK9 346 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 TXLNBQ8N3L3 684 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 OR9A1PQ8NGU1 263 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 NR4A3Q92570 626 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 MMABQ96EY8 250 aaPredicted RBP17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 EIF2B3Q9NR50 452 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 CRYL1Q9Y2S2 319 aa17.51■□□□□ 0.39
SSSCA1-206ENST00000531405 ADGRG4Q8IZF6 3080 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 CACNA1CQ13936 2221 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 TRAV17A0A0B4J275 112 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 PCDH17O14917 1159 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 VPS26AO75436 327 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 HEXBP07686 556 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 ITGAMP11215 1152 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 NPY2RP49146 381 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 TYSND1Q2T9J0 566 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 ANKRD20A4Q4UJ75 823 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 LRRC8BQ6P9F7 803 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 PPFIBP2Q8ND30 876 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 SMPDL3AQ92484 453 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 ABCF3Q9NUQ8 709 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 BFARQ9NZS9 450 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 COPG2Q9UBF2 871 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 TAC3Q9UHF0 121 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 CDC14AQ9UNH5 594 aa17.5■□□□□ 0.39
SSSCA1-206ENST00000531405 MRPS2Q9Y399 296 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms