RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ZNF670Q9BS34 389 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 ZNF700Q9H0M5 742 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 SLC25A51Q9H1U9 297 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 ZNF304Q9HCX3 659 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 ANKRD10Q9NXR5 420 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 OR6C2Q9NZP2 312 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 PLAGL1Q9UM63 463 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 ARHGAP21Q5T5U3 1957 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 HEATR5BQ9P2D3 2071 aa7.79□□□□□ -1.16
CD44-232ENST00000531118 RNF212BA8MTL3 300 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 ISM1B1AKI9 464 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 FFAR3O14843 346 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 GPR42O15529 346 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 SASH3O75995 380 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 TPBGLP0DKB5 382 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 EEF1GP26641 437 aaKnown RBP7.78□□□□□ -1.16
CD44-232ENST00000531118 PKLRP30613 574 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 PTGS2P35354 604 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 SOX18P35713 384 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 GJC1P36383 396 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 CHRNA4P43681 627 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 ST13P50502 369 aaKnown RBP7.78□□□□□ -1.16
CD44-232ENST00000531118 EMP2P54851 167 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 NUP107P57740 925 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 SLC10A2Q12908 348 aaPredicted RBP7.78□□□□□ -1.16
CD44-232ENST00000531118 KIR2DS3Q14952 304 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 TCP11X2Q5H9J9 407 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 FCRLBQ6BAA4 426 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 CCDC70Q6NSX1 233 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 PRMT9Q6P2P2 845 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.78□□□□□ -1.16
CD44-232ENST00000531118 PQLC3Q8N755 202 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 MLKLQ8NB16 471 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 MYRIPQ8NFW9 859 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 BLOC1S5Q8TDH9 187 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 FAF2Q96CS3 445 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 C10orf90Q96M02 699 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 TUBB6Q9BUF5 446 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 TP63Q9H3D4 680 aaPredicted RBP7.78□□□□□ -1.16
CD44-232ENST00000531118 HACD3Q9P035 362 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 CRLS1Q9UJA2 301 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 PKP3Q9Y446 797 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 FAM169AQ9Y6X4 670 aa7.78□□□□□ -1.16
CD44-232ENST00000531118 A0A1B0GTH9 108 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 A6NNC1 897 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 H7C1Q1 480 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 TFECO14948 347 aaPredicted RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 NDUFB5O43674 189 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 HEXBP07686 556 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 RALBP11234 206 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 FERP16591 822 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ADH7P40394 386 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 EFNA3P52797 238 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 DCAF7P61962 342 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 RPA4Q13156 261 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 SNTB1Q13884 538 aaKnown RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 KEAP1Q14145 624 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 FASTKQ14296 549 aaKnown RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 PTPRCAPQ14761 206 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ZC3H12BQ5HYM0 836 aaKnown RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 ACER2Q5QJU3 275 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 FKBP15Q5T1M5 1219 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 SHEQ5VZ18 495 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 SPINK14Q6IE38 97 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ARSKQ6UWY0 536 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 C1orf229Q6ZS94 237 aaPredicted RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 CHSY3Q70JA7 882 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 CRLF3Q8IUI8 442 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 NIPA2Q8N8Q9 360 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 SIMC1Q8NDZ2 872 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 NEK11Q8NG66 645 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ZNF398Q8TD17 642 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 DCUN1D1Q96GG9 259 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 IMMP1LQ96LU5 166 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ZNF354BQ96LW1 612 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 CITED4Q96RK1 184 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 NPAS2Q99743 824 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 UTP23Q9BRU9 249 aaKnown RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 ASB8Q9H765 288 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 VPS37BQ9H9H4 285 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 UBP1Q9NZI7 540 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 CRIM1Q9NZV1 1036 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ZFATQ9P243 1243 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 MYO1AQ9UBC5 1043 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 ASF1AQ9Y294 204 aa7.77□□□□□ -1.17
CD44-232ENST00000531118 TDRKHQ9Y2W6 561 aaKnown RBP7.77□□□□□ -1.17
CD44-232ENST00000531118 A0A0A6YYK5 440 aaPredicted RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 HYKKA2RU49 373 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 GABRR3A8MPY1 467 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 A8MUI8 341 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 STX7O15400 261 aaKnown RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 NME2P1O60361 137 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 SLC25A12O75746 678 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 NEURL1O76050 574 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 SRP72O76094 671 aaKnown RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 SEC24DO94855 1032 aaPredicted RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 ICAM2P13598 275 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 NME2P22392 152 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 CD96P40200 585 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms