RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 ARF3P61204 181 aaPredicted RBP10.81□□□□□ -0.68
VPS28-214ENST00000531032 DSG2Q14126 1118 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 ARHGAP19Q14CB8 494 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 TPSAB1Q15661 275 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 ANKRD20A4Q4UJ75 823 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 VWA2Q5GFL6 755 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 ARMC3Q5W041 872 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 KIAA0930Q6ICG6 404 aaPredicted RBP10.81□□□□□ -0.68
VPS28-214ENST00000531032 CES3Q6UWW8 571 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 SDCCAG8Q86SQ7 713 aaPredicted RBP10.81□□□□□ -0.68
VPS28-214ENST00000531032 TICAM1Q8IUC6 712 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 KBTBD2Q8IY47 623 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 PRSS58Q8IYP2 241 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 ARHGEF39Q8N4T4 335 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 OTUD6BQ8N6M0 293 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 SMPDL3AQ92484 453 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 C8orf44Q96CB5 159 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 CABS1Q96KC9 395 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 PLCD4Q9BRC7 762 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 ACAT2Q9BWD1 397 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 SYNPO2LQ9H987 977 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 ZNF160Q9HCG1 818 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 LZTFL1Q9NQ48 299 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 C14orf105Q9NVL8 296 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 STOX2Q9P2F5 926 aaPredicted RBP10.81□□□□□ -0.68
VPS28-214ENST00000531032 SOX13Q9UN79 622 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 HEATR5BQ9P2D3 2071 aa10.81□□□□□ -0.68
VPS28-214ENST00000531032 CREBBPQ92793 2442 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 DIDO1Q9BTC0 2240 aaKnown RBP10.8□□□□□ -0.68
VPS28-214ENST00000531032 NSG1A0A0A6YYJ2 146 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 IDSB3KWA1 339 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 GOLGA8KD6RF30 607 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 GOLGA8TH3BQL2 631 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PFDN6O15212 129 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PRPF4O43172 522 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS28-214ENST00000531032 LRRTM2O43300 516 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 VPS26AO75436 327 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PRR35P0CG20 571 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 CHRM3P20309 590 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PER3P56645 1201 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 RELAQ04206 551 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PRDX1Q06830 199 aaKnown RBP10.8□□□□□ -0.68
VPS28-214ENST00000531032 KLHL38Q2WGJ6 581 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 ACSBG2Q5FVE4 666 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 ZNF324BQ6AW86 544 aaPredicted RBP10.8□□□□□ -0.68
VPS28-214ENST00000531032 ZNF425Q6IV72 752 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 FAM180AQ6UWF9 173 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 SUSD1Q6UWL2 747 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 LINC00696Q6ZRV3 163 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 CENPUQ71F23 418 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 NDUFAF7Q7L592 441 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 GSTA5Q7RTV2 222 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PAQR7Q86WK9 346 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 CILP2Q8IUL8 1156 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 CSNK1A1LQ8N752 337 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 BCORP1Q8N888 145 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 AMER3Q8N944 861 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 CATSPER1Q8NEC5 780 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 PSMF1Q92530 271 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 FAM136AQ96C01 138 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 OR2A5Q96R48 311 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 TGIF2Q9GZN2 237 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 MRPS30Q9NP92 439 aaKnown RBP10.8□□□□□ -0.68
VPS28-214ENST00000531032 FAM114A2Q9NRY5 505 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 GALPQ9UBC7 116 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 TRPC4Q9UBN4 977 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
VPS28-214ENST00000531032 CDC14AQ9UNH5 594 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 OSGIN2Q9Y236 505 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 RUVBL1Q9Y265 456 aaKnown RBP10.8□□□□□ -0.68
VPS28-214ENST00000531032 CRYL1Q9Y2S2 319 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 LRBAP50851 2863 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 SVILO95425 2214 aa10.8□□□□□ -0.68
VPS28-214ENST00000531032 ZGRF1Q86YA3 2104 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 CPAMD8Q8IZJ3 1885 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 IGHV1-45A0A0A0MS14 117 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 TCRBV7S3A2A0A539 114 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 PCDH17O14917 1159 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 CCNDBP1O95273 360 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 FGGP02679 453 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 CATP04040 527 aaKnown RBP10.79□□□□□ -0.68
VPS28-214ENST00000531032 SERPINA7P05543 415 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 STSP08842 583 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 PKMP14618 531 aaKnown RBP10.79□□□□□ -0.68
VPS28-214ENST00000531032 EZRP15311 586 aaKnown RBP10.79□□□□□ -0.68
VPS28-214ENST00000531032 RPA3P35244 121 aaPredicted RBP10.79□□□□□ -0.68
VPS28-214ENST00000531032 HSD17B2P37059 387 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 SLC26A3P40879 764 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 MAGEA6P43360 314 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 KCNJ1P48048 391 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 CLCN7P51798 805 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 PNLIPRP1P54315 467 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 EMP2P54851 167 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 ARG2P78540 354 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 INAQ16352 499 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 HKDC1Q2TB90 917 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 GARNL3Q5VVW2 1013 aa10.79□□□□□ -0.68
VPS28-214ENST00000531032 ICE2Q659A1 982 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms