RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	TPP2	P29144	1249 aa	Predicted RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	HOXD12	P35452	270 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	HERVK_113	P63132	956 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	LYSMD4	Q5XG99	296 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	RABEPK	Q7Z6M1	372 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	PTRH1	Q86Y79	214 aa	Known RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	RGL4	Q8IZJ4	473 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	KLHDC7B	Q96G42	594 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZC3H10	Q96K80	434 aa	Known RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	COX4I2	Q96KJ9	171 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	BMF	Q96LC9	184 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	LINC00615	Q96LM1	132 aa	Predicted RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	WDR92	Q96MX6	357 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	MYOC	Q99972	504 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	ERVK-6	Q9BXR3	956 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	TRIM54	Q9BYV2	358 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	OR2AG1	Q9H205	316 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	AKTIP	Q9H8T0	292 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	LATS2	Q9NRM7	1088 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	AASDHPPT	Q9NRN7	309 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	EIF2B4	Q9UI10	523 aa	Known RBP	14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	ZNF639	Q9UID6	485 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	CDC14A	Q9UNH5	594 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	SLC17A4	Q9Y2C5	497 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	PCDHA9	Q9Y5H5	950 aa		14.15	□□□□□ -0.14
NR1H3-231	ENST00000529540	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	C17orf113	A0A1B0GUU1	675 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TCRBV5S2	A0A599	114 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	POM121B	A6NF01	834 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	EIF3F	O00303	357 aa	Predicted RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	ANGPT2	O15123	496 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	KMO	O15229	486 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	VPS4B	O75351	444 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SP9	P0CG40	484 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CAPN3	P20807	821 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	VARS	P26640	1264 aa	Known RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	HLCS	P50747	726 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	B4GALNT1	Q00973	533 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	RAB39A	Q14964	217 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TEAD4	Q15561	434 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	KIF19	Q2TAC6	998 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CTSL3P	Q5NE16	218 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	KANK2	Q63ZY3	851 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CLEC6A	Q6EIG7	209 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	RPS27L	Q71UM5	84 aa	Known RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CEP68	Q76N32	757 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	LRRTM4	Q86VH4	590 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SPPL2C	Q8IUH8	684 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TRAPPC5	Q8IUR0	188 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TMEFF1	Q8IYR6	380 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	DHRSX	Q8N5I4	330 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	OR56A4	Q8NGH8	313 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	GIPC3	Q8TF64	312 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SNRNP27	Q8WVK2	155 aa	Known RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	ANKRD49	Q8WVL7	239 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	PHF21B	Q96EK2	531 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	C3orf30	Q96M34	536 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	ORAI3	Q9BRQ5	295 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SLC39A3	Q9BRY0	314 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SDR39U1	Q9NRG7	319 aa	Predicted RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SMPD3	Q9NY59	655 aa	Predicted RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TRMT6	Q9UJA5	497 aa	Known RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	AURKC	Q9UQB9	309 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	NUMA1	Q14980	2115 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TTC28	Q96AY4	2481 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540		H0YAE9	185 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	GIPC1	O14908	333 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	MTX2	O75431	263 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	THEGL	P0DJG4	465 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SLC6A2	P23975	617 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	RGS4	P49798	205 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	BLK	P51451	505 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	AFF3	P51826	1226 aa	Known RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CLDN2	P57739	230 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	PHEX	P78562	749 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	PMS2P3	Q13401	168 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	MOG	Q16653	247 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	PLK5	Q496M5	336 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	ZNF549	Q6P9A3	640 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TMEM220	Q6QAJ8	160 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540		Q6ZSR6	202 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	ISCA2	Q86U28	154 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TBC1D21	Q8IYX1	336 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CLDN19	Q8N6F1	224 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	RASGEF1A	Q8N9B8	481 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SNX31	Q8N9S9	440 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	PDPR	Q8NCN5	879 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	TMEM125	Q96AQ2	219 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	THAP11	Q96EK4	314 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	CCM2	Q9BSQ5	444 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	LGR4	Q9BXB1	951 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	SLC52A3	Q9NQ40	469 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	GPR27	Q9NS67	375 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	OAZ3	Q9UMX2	235 aa		14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	OAS3	Q9Y6K5	1087 aa	Known RBP	14.14	□□□□□ -0.15
NR1H3-231	ENST00000529540	MUC3A	Q02505	3323 aa		14.13	□□□□□ -0.15
NR1H3-231	ENST00000529540	RNF103-CHMP3	A0A140T963	221 aa		14.13	□□□□□ -0.15
NR1H3-231	ENST00000529540	BCAT2	O15382	392 aa	Predicted RBP	14.13	□□□□□ -0.15
NR1H3-231	ENST00000529540	SUPT7L	O94864	414 aa		14.13	□□□□□ -0.15
NR1H3-231	ENST00000529540	CBSL	P0DN79	551 aa		14.13	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms