RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TGM7Q96PF1 710 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 HAUS8Q9BT25 410 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 C20orf27Q9GZN8 174 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RAB33BQ9H082 229 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLC6A20Q9NP91 592 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CUEDC1Q9NWM3 386 aaPredicted RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TMEM9Q9P0T7 183 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KLHL20Q9Y2M5 609 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ANGPTL3Q9Y5C1 460 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KCNE2Q9Y6J6 123 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 LAMA5O15230 3695 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PCM1Q15154 2024 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 E7EQ34 232 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MATN2O00339 956 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZW10O43264 779 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KIF1CO43896 1103 aaKnown RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 NPHS1O60500 1241 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 H2AFYO75367 372 aaKnown RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 LYPLA1O75608 230 aaPredicted RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CHRNGP07510 517 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CDH1P12830 882 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PVRP15151 417 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CSRP1P21291 193 aaKnown RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SDHBP21912 280 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PIK3CGP48736 1102 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 NOVA1P51513 510 aaKnown RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 BST1Q10588 318 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TRAF3Q13114 568 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 STX3Q13277 289 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RCN2Q14257 317 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TRIP6Q15654 476 aaKnown RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLC5A12Q1EHB4 618 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CATSPEREQ5SY80 951 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FAM219BQ5XKK7 198 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLCO4C1Q6ZQN7 724 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FAM92BQ6ZTR7 304 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 C17orf64Q86WR6 236 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLC5A11Q8WWX8 675 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CNDP1Q96KN2 507 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DRC3Q9H069 523 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GPRC5BQ9NZH0 403 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZNF225Q9UK10 706 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DYRK1BQ9Y463 629 aa11.7□□□□□ -0.54
TRAF3IP2-211ENST00000528599 NTN3O00634 580 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 NRP2O60462 931 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CPNE6O95741 557 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 C9P02748 559 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GNAZP19086 355 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GRK2P25098 689 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MPSTP25325 297 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 VARSP26640 1264 aaKnown RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CMPK1P30085 196 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GRIA3P42263 894 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SH3BP2P78314 561 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ABATP80404 500 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PCDH1Q08174 1060 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 LCP2Q13094 533 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CHIT1Q13231 466 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RBBP7Q16576 425 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ARL13AQ5H913 290 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 NXPE4Q6UWF7 544 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GLRX5Q86SX6 157 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PLXDC1Q8IUK5 500 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TRIM42Q8IWZ5 723 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DCBLD1Q8N8Z6 715 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RAB3IL1Q8TBN0 382 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZDHHC12Q96GR4 267 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CDK15Q96Q40 435 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MAP3K3Q99759 626 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DPH7Q9BTV6 452 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SHCBP1LQ9BZQ2 653 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KLHL25Q9H0H3 589 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TNFRSF12AQ9NP84 129 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MRPS30Q9NP92 439 aaKnown RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KLHL3Q9UH77 587 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MN1Q10571 1320 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SNRNP200O75643 2136 aaKnown RBP11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZFHX4Q86UP3 3567 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 UNC13CQ8NB66 2214 aa11.69□□□□□ -0.54
TRAF3IP2-211ENST00000528599 A0A0J9YY10 115 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TMEM114B3SHH9 223 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 H7BY64 318 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KLF11O14901 512 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CLGNO14967 610 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PRAMEF10O60809 474 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SNNO75324 88 aaPredicted RBP11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KATNA1O75449 491 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 WFS1O76024 890 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CCNDBP1O95273 360 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 MLYCDO95822 493 aa11.68□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CEACAM1P13688 526 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms