RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ZFP36L1Q07352 338 aaKnown RBP11.49□□□□□ -0.57
PVT1-215ENST00000522963 KIR2DS3Q14952 304 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 C16orf72Q14CZ0 275 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 RTP5Q14D33 572 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 THEMIS2Q5TEJ8 643 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 PRAMEF13Q5VWM6 474 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 CES4AQ5XG92 561 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 IRGCQ6NXR0 463 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 TMEM71Q6P5X7 295 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 KLHL35Q6PF15 583 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 LCTLQ6UWM7 567 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 ZCCHC23Q6ZST2 131 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 LRRC70Q7Z2Q7 622 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 GOLGA7Q7Z5G4 137 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 SLITRK4Q8IW52 837 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 FAM20CQ8IXL6 584 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 TEX9Q8N6V9 391 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 CCNYL1Q8N7R7 359 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 SNX31Q8N9S9 440 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 OR4D9Q8NGE8 314 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 OR2A1Q8NGT9 310 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 OR6Y1Q8NGX8 325 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 FAM76AQ8TAV0 307 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 ZNF483Q8TF39 744 aaPredicted RBP11.49□□□□□ -0.57
PVT1-215ENST00000522963 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 LIN37Q96GY3 246 aaPredicted RBP11.49□□□□□ -0.57
PVT1-215ENST00000522963 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 TGM7Q96PF1 710 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 OR2A14Q96R47 310 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 CMKLR1Q99788 373 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 ACAT2Q9BWD1 397 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 EPB41L1Q9H4G0 881 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
PVT1-215ENST00000522963 DNAJC11Q9NVH1 559 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 OPTCQ9UBM4 332 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 TAC3Q9UHF0 121 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 PCTPQ9UKL6 214 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 SH2B3Q9UQQ2 575 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 PCDHB11Q9Y5F2 797 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 C2orf74A8MZ97 194 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 PLD2O14939 933 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 CAPN5O15484 640 aaPredicted RBP11.48□□□□□ -0.57
PVT1-215ENST00000522963 RASSF9O75901 435 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 SUPT7LO94864 414 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 TSPAN8P19075 237 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 BGNP21810 368 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 CCND1P24385 295 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 PRDX3P30048 256 aaKnown RBP11.48□□□□□ -0.57
PVT1-215ENST00000522963 CSTF2P33240 577 aaKnown RBP eCLIP11.48□□□□□ -0.57
PVT1-215ENST00000522963 CCR10P46092 362 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 CDH13P55290 713 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 ASPHQ12797 758 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 CDC16Q13042 620 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 PRKAA1Q13131 559 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 SQSTM1Q13501 440 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 GTF2H2Q13888 395 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 CHI3L2Q15782 390 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 ARMC6Q6NXE6 501 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 GTF2H2CQ6P1K8 395 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 METTL2BQ6P1Q9 378 aaKnown RBP11.48□□□□□ -0.57
PVT1-215ENST00000522963 FAM92BQ6ZTR7 304 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 FAM129CQ86XR2 697 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 PLXDC1Q8IUK5 500 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 ARFGAP2Q8N6H7 521 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 SLC22A18Q96BI1 424 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 NAF1Q96HR8 494 aaKnown RBP11.48□□□□□ -0.57
PVT1-215ENST00000522963 PPM1MQ96MI6 270 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 MIPEPQ99797 713 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 DPYSL5Q9BPU6 564 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 HAUS8Q9BT25 410 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 RAB33BQ9H082 229 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 PCBD2Q9H0N5 130 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 GSTO2Q9H4Y5 243 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 ZBTB26Q9HCK0 441 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 EPHA6Q9UF33 1036 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 POMT2Q9UKY4 750 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 RAXQ9Y2V3 346 aa11.48□□□□□ -0.57
PVT1-215ENST00000522963 EFCAB7A8K855 629 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 TAF4O00268 1085 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 MATN2O00339 956 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 PPP6CO00743 305 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 PRAMEF4O60810 478 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 SERPINE1P05121 402 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 THRAP10827 490 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 NEFHP12036 1026 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 CCL4P13236 92 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 EPB42P16452 691 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 ETV5P41161 510 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 SEPHS1P49903 392 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 CLCQ05315 142 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 PRDX1Q06830 199 aaKnown RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 EIF3IQ13347 325 aaKnown RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 SF1Q15637 639 aaKnown RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 PDK4Q16654 411 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 CLPPQ16740 277 aaPredicted RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 SLC5A12Q1EHB4 618 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 CFAP157Q5JU67 520 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 PRAMEF9Q5VWM5 478 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 KIAA1614Q5VZ46 1190 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms