RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 KLHDC8AQ8IYD2 350 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 TDHQ8IZJ6 230 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 KBTBD3Q8NAB2 608 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 LPCAT1Q8NF37 534 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR1J1Q8NGS3 322 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR52N5Q8NH56 324 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 PHLDA1Q8WV24 401 aaPredicted RBP3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 CCDC107Q8WV48 283 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 SCRN2Q96FV2 425 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 C5orf30Q96GV9 206 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 DOCK7Q96N67 2140 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 LRRC1Q9BTT6 524 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC29A3Q9BZD2 475 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR2B2Q9GZK3 357 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 C5orf66Q9H5L9 145 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 FKRPQ9H9S5 495 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 RAB9BQ9NP90 201 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 CD93Q9NPY3 652 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC38A7Q9NVC3 462 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 SPHK1Q9NYA1 384 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 STK26Q9P289 416 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 FETUBQ9UGM5 382 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 SMARCA2P51531 1590 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 A0A087X0K7 114 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRBV5-5A0A0J9YX44 114 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 LOC101059948A0A1B0GTJ6 334 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 A0A1B0GUV1 79 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 MTMR11A4FU01 709 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ANTXRLA6NF34 631 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ANKDD1BA6NHY2 528 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ARPC2O15144 300 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC28A2O43868 658 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ACSL4O60488 711 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 SNX3O60493 162 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 SEC22BO75396 215 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 LUC7L3O95232 432 aaKnown RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 NTN1O95631 604 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 C9P02748 559 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 KRT3P12035 628 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 EFNA1P20827 205 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 SP100P23497 879 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ALDH1B1P30837 517 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 NR2C2P49116 596 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 THBS3P49746 956 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 SERPINH1P50454 418 aaKnown RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 PITX1P78337 314 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 CACNG1Q06432 222 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 MSLNQ13421 630 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRA2AQ13595 282 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 PDE7AQ13946 482 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 KEAP1Q14145 624 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 HERC3Q15034 1050 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 NONOQ15233 471 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 XKR6Q5GH73 641 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR4A47Q6IF82 309 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 CASC4Q6P4E1 433 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 CNSTQ6PJW8 725 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZNF554Q86TJ5 538 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ASPGQ86U10 573 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 RTN4RL2Q86UN3 420 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 EXOC3L1Q86VI1 746 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ANKRD46Q86W74 232 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 SFR1Q86XK3 245 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 CFAP206Q8IYR0 622 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 NDUFAF2Q8N183 169 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 C9orf106Q8NAJ2 232 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 CLEC1AQ8NC01 280 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 LMO3Q8TAP4 145 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ATP6V0A1Q93050 837 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 RTP4Q96DX8 246 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 IL17FQ96PD4 163 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRMT1Q99873 361 aaKnown RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRAF4Q9BUZ4 470 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 UBQLN3Q9H347 655 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 THAP9Q9H5L6 903 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZDHHC6Q9H6R6 413 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 MAGEF1Q9HAY2 307 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZBTB20Q9HC78 741 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 RAVER2Q9HCJ3 691 aaKnown RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRMT8Q9NR22 394 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 OLFML3Q9NRN5 406 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 PTTG2Q9NZH5 202 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 AKAP7Q9P0M2 348 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 NOCTQ9UK39 431 aaKnown RBP3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 STX8Q9UNK0 236 aa3.14□□□□□ -1.91
HMGN1P28-201ENST00000521340 PEG3Q9GZU2 1588 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 IGLV9-49A0A0B4J1Y8 123 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC9B1P1A6NJY1 282 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 C2orf81A6NN90 581 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 SRRM4A7MD48 611 aaKnown RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 TMEM150CB9EJG8 249 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 CAPN9O14815 690 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 PGRMC2O15173 223 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ATP9AO75110 1047 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 PAPSS2O95340 614 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 MOCS2O96007 188 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 APOHP02749 345 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 EPORP19235 508 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms