RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 E2F3O00716 465 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 MT-CYBP00156 380 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 KRT14P02533 472 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 CHRM4P08173 479 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 MYOGP15173 224 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 NPPBP16860 134 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 EDNRAP25101 427 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 FUSP35637 526 aaKnown RBP eCLIP-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC1A4P43007 532 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 FNTAP49354 379 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 CDK7P50613 346 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 RAG2P55895 527 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 DEFB103AP81534 67 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 IL11RAQ14626 422 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 TMEM132DQ14C87 1099 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 HERC3Q15034 1050 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 CCL14Q16627 93 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 FAM83EQ2M2I3 478 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 PDLIM3Q53GG5 364 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 LIPKQ5VXJ0 399 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 CTR9Q6PD62 1173 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 GPAT4Q86UL3 456 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 FAM160B2Q86V87 743 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 DNAAF5Q86Y56 855 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 C6orf223Q8N319 242 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 DCAF4L2Q8NA75 395 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 OR13F1Q8NGS4 319 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC35G2Q8TBE7 412 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 RNFT2Q96EX2 444 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 ACOX2Q99424 681 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 CD180Q99467 661 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 IFIH1Q9BYX4 1025 aaKnown RBP-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 ARFGAP3Q9NP61 516 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZCCHC3Q9NUD5 404 aaKnown RBP-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 WDR35Q9P2L0 1181 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZNF221Q9UK13 617 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 SPATA2Q9UM82 520 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 B3GALT5Q9Y2C3 310 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 FLNCQ14315 2725 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 TEX13CA0A0J9YWL9 993 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 RIPK2O43353 540 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 HPNP05981 417 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 ADORA3P0DMS8 318 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 LYNX1P0DP58 116 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 PF4V1P10720 104 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 CNGA1P29973 690 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 TIA1P31483 386 aaKnown RBP eCLIP-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 PNPLA4P41247 253 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 PSMC4P43686 418 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 TM4SF4P48230 202 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 P2RY4P51582 365 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 ERVK-16P61578 105 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 DMPKQ09013 629 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 PDCLQ13371 301 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 SLC10A5Q5PT55 438 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 ACSM2BQ68CK6 577 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 DENND1BQ6P3S1 775 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 RFWD3Q6PCD5 774 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 INO80CQ6PI98 192 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 DPPA4Q7L190 304 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 BEND5Q7L4P6 421 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 DET1Q7L5Y6 550 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 LDB1Q86U70 411 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 GCSAMQ8N6F7 178 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 DAZLQ92904 295 aaKnown RBP-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 SLC35E1Q96K37 410 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 PLEKHA2Q9HB19 425 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 FGF21Q9NSA1 209 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 SNTG1Q9NSN8 517 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 BAG5Q9UL15 447 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 MRPL42Q9Y6G3 142 aaKnown RBP-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 LRP4O75096 1905 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 KAT6BQ8WYB5 2073 aa-1.41□□□□□ -2.64
RNU6-539P-201ENST00000516665 PLA2R1Q13018 1463 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 TUBGCP6Q96RT7 1819 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 A0A1W2PPC4 97 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 SNURFLB1AK76 121 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 TEX28O15482 410 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 TRAF3IP2O43734 574 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 ACTL6BO94805 426 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 ECDO95905 644 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 PGAM2P15259 253 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 PSMB1P20618 241 aaKnown RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 HMGCLP35914 325 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 EXT1Q16394 746 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 CDKN3Q16667 212 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZNF630Q2M218 657 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZSCAN23Q3MJ62 389 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 PAN3Q58A45 887 aaKnown RBP-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 SERTAD4-AS1Q5TG53 156 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 LCN1P1Q5VSP4 162 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 RNF220Q5VTB9 566 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 DGAT2L7PQ6IED9 249 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR52W1Q6IF63 320 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 RHBDD2Q6NTF9 364 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 GCNT2Q8N0V5 402 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 RASGEF1CQ8N431 466 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 FTMTQ8N4E7 242 aa-1.42□□□□□ -2.64
RNU6-539P-201ENST00000516665 CPSF7Q8N684 471 aaKnown RBP-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms