RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 XRCC6P12956 609 aaKnown RBP eCLIP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GSPT1P15170 499 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ST6GAL1P15907 406 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAHP16930 419 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZKSCAN1P17029 563 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KRT15P19012 456 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TSPAN8P19075 237 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GNAT2P19087 354 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KCNA4P22459 653 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GABRR1P24046 479 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCNCP24863 283 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RBL1P28749 1068 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GTF2E1P29083 439 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PCSK1P29120 753 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OXTRP30559 389 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ACSL1P33121 698 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GALNSP34059 522 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CLCN1P35523 988 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CHKAP35790 457 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGHMBP2P38935 993 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RFC3P40938 356 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CASRP41180 1078 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DPP6P42658 865 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GPR4P46093 362 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OR3A4PP47883 348 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TRPC1P48995 793 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF165P49910 485 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCR6P51684 374 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NEK4P51957 841 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NRLP54845 237 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 UGT2B15P54855 530 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EIF5P55010 431 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AQP5P55064 265 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NAP1L1P55209 391 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FOXA3P55318 350 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCL23P55773 120 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CTBP2P56545 445 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BCAR1P56945 870 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FOXL2P58012 376 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VSX2P58304 361 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RAB15P59190 212 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CNBPP62633 177 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYP4F2P78329 520 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GTF2IP78347 998 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NKX3-2P78367 333 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BTN3A2P78410 334 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GPSM2P81274 684 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ATP2B2Q01814 1243 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NHLH2Q02577 135 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PTPN12Q05209 780 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TYRO3Q06418 890 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CD69Q07108 199 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYP4F3Q08477 520 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLFN5Q08AF3 891 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF543Q08ER8 600 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SIGLEC14Q08ET2 396 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC10A7Q0GE19 358 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DLG1Q12959 904 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DAZ2Q13117 558 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MYBPHQ13203 477 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SEMA3BQ13214 749 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SERINC3Q13530 473 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MORC3Q14149 939 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BTG3Q14201 252 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRRC32Q14392 662 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KCNB1Q14721 858 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MEF2DQ14814 521 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC9A5Q14940 896 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FASTKD3Q14CZ7 662 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KIAA0040Q15053 153 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PGM5Q15124 567 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SEC23BQ15437 767 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SF3A1Q15459 793 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DIXDC1Q155Q3 683 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CST6Q15828 149 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 INAQ16352 499 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PFKFB4Q16877 469 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KIAA0753Q2KHM9 967 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TSR1Q2NL82 804 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PGGHGQ32M88 737 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCDC14Q49A88 953 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CERKLQ49MI3 558 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC9C1Q4G0N8 1177 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TDRD12Q587J7 1177 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ESCO1Q5FWF5 840 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RNASE13Q5GAN3 156 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 WDR38Q5JTN6 314 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RBM48Q5RL73 367 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAM27D1Q5T7N8 215 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DEPDC1Q5TB30 811 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 THEMIS2Q5TEJ8 643 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CEP135Q66GS9 1140 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DIEXFQ68CQ4 756 aaKnown RBP-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MBLAC2Q68D91 279 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KCTD16Q68DU8 428 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 STUMQ69YW2 141 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NXNQ6DKJ4 435 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FCRL6Q6DN72 434 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ITPRIPL1Q6GPH6 555 aa-0.79□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FRMPD2BQ6IN97 320 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms