RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 TSC2P49815 1807 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 UBA6A0AVT1 1052 aaPredicted RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 ATP6V1G2-DDX39BF2Z307 99 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 I3L521 148 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 MYL12BO14950 172 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 FGF10O15520 208 aaPredicted RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 HCN1O60741 890 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 TSPAN12O95859 305 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 PAHP00439 452 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 GJB1P08034 283 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 STSP08842 583 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 MYL12AP19105 171 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 EPHA2P29317 976 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 KIR2DL3P43628 341 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 ITGA1P56199 1179 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 PER3P56645 1201 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 PLIN5Q00G26 463 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 DCAF4L1Q3SXM0 396 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 OR4F3Q6IEY1 312 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 ERICH5Q6P6B1 374 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 IL27RAQ6UWB1 636 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 FAM131AQ6UXB0 335 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 LDB1Q86U70 411 aaPredicted RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 CDH24Q86UP0 819 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 DUSP18Q8NEJ0 188 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 LPCAT1Q8NF37 534 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 FUBP1Q96AE4 644 aaKnown RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 DPY30Q9C005 99 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 KCNH6Q9H252 994 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 PPA2Q9H2U2 334 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 SPNS1Q9H2V7 528 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 TRIM45Q9H8W5 580 aaPredicted RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 TAS2R13Q9NYV9 303 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 CNOT2Q9NZN8 540 aaKnown RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 GALPQ9UBC7 116 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 SLC23A1Q9UHI7 598 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF490Q9ULM2 529 aaPredicted RBP12.46□□□□□ -0.42
SMAD1-215ENST00000515385 STUB1Q9UNE7 303 aa12.46□□□□□ -0.42
SMAD1-215ENST00000515385 PPEF2O14830 753 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF682O95780 498 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 LGI1O95970 557 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 PGRP06401 933 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 CSF3P09919 207 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 HSMCR30P0CW71 290 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 PCSK2P16519 638 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 BTF3P20290 206 aaKnown RBP12.45□□□□□ -0.42
SMAD1-215ENST00000515385 LMO2P25791 158 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 NDUFV1P49821 464 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 DAOAP59103 153 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 RRAS2P62070 204 aaPredicted RBP12.45□□□□□ -0.42
SMAD1-215ENST00000515385 PURAQ00577 322 aaKnown RBP12.45□□□□□ -0.42
SMAD1-215ENST00000515385 MGAT3Q09327 533 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ST3GAL4Q11206 333 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 DGKZQ13574 1117 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 KCNC3Q14003 757 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 GALEQ14376 348 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZBTB6Q15916 424 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 TSTQ16762 297 aaKnown RBP12.45□□□□□ -0.42
SMAD1-215ENST00000515385 FAM174BQ3ZCQ3 159 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZMAT1Q5H9K5 638 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 GARNL3Q5VVW2 1013 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 TMEM65Q6PI78 240 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 PLEKHM3Q6ZWE6 761 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 RASAL3Q86YV0 1011 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF557Q8N988 423 aaPredicted RBP12.45□□□□□ -0.42
SMAD1-215ENST00000515385 METTL6Q8TCB7 284 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 TTPALQ9BTX7 342 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 TAPBPLQ9BX59 468 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 TNKS2Q9H2K2 1166 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 CATSPERBQ9H7T0 1116 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 OSER1Q9NX31 292 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 THUMPD1Q9NXG2 353 aaKnown RBP12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ASIC5Q9NY37 505 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 PTTG3PQ9NZH4 202 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 SEC14L4Q9UDX3 406 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 MAN2B2Q9Y2E5 1009 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ALG5Q9Y673 324 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 CSNK1G3Q9Y6M4 447 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ANKRD31Q8N7Z5 1873 aa12.45□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF638Q14966 1978 aaKnown RBP12.44□□□□□ -0.42
SMAD1-215ENST00000515385 BTN3A3O00478 584 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 SLC43A1O75387 559 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 COL6A1P12109 1028 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 POU3F3P20264 500 aaPredicted RBP12.44□□□□□ -0.42
SMAD1-215ENST00000515385 WEE1P30291 646 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 CHRNA5P30532 468 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 RPS19P39019 145 aaKnown RBP12.44□□□□□ -0.42
SMAD1-215ENST00000515385 PNPLA4P41247 253 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 MAP2K3P46734 347 aa12.44□□□□□ -0.42
SMAD1-215ENST00000515385 CPT1AP50416 773 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms