RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RFPL3O75679 317 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 WFS1O76024 890 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 SUPT7LO94864 414 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 OTCP00480 354 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 MSL3P1P0C860 447 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 PKNOX1P55347 436 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 TRA2AQ13595 282 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 RCN2Q14257 317 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 GGTA1PQ4G0N0 100 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 CFAP157Q5JU67 520 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 THEMIS2Q5TEJ8 643 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 LIPJQ5W064 366 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 ATG9BQ674R7 924 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 SLCO4C1Q6ZQN7 724 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 FAM129CQ86XR2 697 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 KIRREL3Q8IZU9 778 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 TEX9Q8N6V9 391 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 Q8N9G6 341 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 L3MBTL4Q8NA19 623 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 SLC5A11Q8WWX8 675 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 NCSTNQ92542 709 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 NEIL2Q969S2 332 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 ESAMQ96AP7 390 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 GFM1Q96RP9 751 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 SEMA6CQ9H3T2 930 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 CCDC134Q9H6E4 229 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 NT5DC2Q9H857 520 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 IPPKQ9H8X2 491 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 MRPS30Q9NP92 439 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 ENAMQ9NRM1 1142 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 HAO1Q9UJM8 370 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 SNX7Q9UNH6 387 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 TSC22D4Q9Y3Q8 395 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 OR2A25A4D2G3 310 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 D6RAR5 112 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 OR7A17O14581 309 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 CLGNO14967 610 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SNNO75324 88 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 EBLN1P0CF75 366 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 THRAP10827 490 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 PSMB5P28074 263 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 HNF4AP41235 474 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 GRIA3P42263 894 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 ZFP36L1Q07352 338 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 TRAF3Q13114 568 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 LAPTM5Q13571 262 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SF1Q15637 639 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 CHI3L2Q15782 390 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 FBXO48Q5FWF7 155 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 C10orf62Q5T681 223 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 CDCP2Q5VXM1 449 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 NKAIN2Q5VXU1 208 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 KIAA1614Q5VZ46 1190 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 ATG16L1Q676U5 607 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 NXPE4Q6UWF7 544 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF574Q6ZN55 896 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 ARHGAP22Q7Z5H3 698 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 PAQR7Q86WK9 346 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SLITRK4Q8IW52 837 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 C2orf73Q8N5S3 287 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SNX31Q8N9S9 440 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 PPP4R1Q8TF05 950 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 CKAP2Q8WWK9 683 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 GRAMD1AQ96CP6 724 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 PTCD3Q96EY7 689 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SEC16BQ96JE7 1060 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SLC41A2Q96JW4 573 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 MAGEB18Q96M61 343 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 NSUN5Q96P11 429 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 TRAPPC9Q96Q05 1148 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 PLCD4Q9BRC7 762 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 EFCAB11Q9BUY7 163 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 MLXIPLQ9NP71 852 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 SLC6A20Q9NP91 592 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 BTRCQ9Y297 605 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 ANGPTL3Q9Y5C1 460 aa11.52□□□□□ -0.57
PDLIM5-220ENST00000514830 PTPRBP23467 1997 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 KCNE1BA0A087WTH5 132 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 E7EQ34 232 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 PRAMEF4O60810 478 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CLDN9O95484 217 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ZBTB11O95625 1053 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ESRRBO95718 433 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 FGF4P08620 206 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 C1GALT1C1LP0DN25 315 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 EZRP15311 586 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 BGNP21810 368 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CXCR2P25025 360 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 GSTM2P28161 218 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CCKBRP32239 447 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 MDH1P40925 334 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms