RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 RPS17P08708 135 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 FURINP09958 794 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 AOAHP28039 575 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 ARRB2P32121 409 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 GLRBP48167 497 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 ALDH18A1P54886 795 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 SRP54P61011 504 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 IRX1P78414 480 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 MC1RQ01726 317 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 CDC16Q13042 620 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 ERV3-1Q14264 604 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 GALNTL6Q49A17 601 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 C14orf28Q4W4Y0 310 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 SH2D4BQ5SQS7 431 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 ZNF678Q5SXM1 525 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 DCAF12Q5T6F0 453 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 METTL21CQ5VZV1 264 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 SBSNQ6UWP8 590 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 NAPRTQ6XQN6 538 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 CYHR1Q6ZMK1 362 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 RNF165Q6ZSG1 346 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 TIPARPQ7Z3E1 657 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 SIDT2Q8NBJ9 832 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 CXorf40AQ8TE69 158 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 SCAMP4Q969E2 229 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 NUS1Q96E22 293 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 LINGO1Q96FE5 620 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 DCUN1D1Q96GG9 259 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 SLC30A3Q99726 388 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 CTRCQ99895 268 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 EFHD1Q9BUP0 239 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 RIOK2Q9BVS4 552 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 DDA1Q9BW61 102 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 ILKAPQ9H0C8 392 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 DPEP2Q9H4A9 486 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 ALG9Q9H6U8 611 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 EML4Q9HC35 981 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 CNOT6Q9ULM6 557 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 STK38LQ9Y2H1 464 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 TNPO3Q9Y5L0 923 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 DNMT3AQ9Y6K1 912 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 PRSS21Q9Y6M0 314 aa10.16□□□□□ -0.78
PDLIM5-217ENST00000512274 MATN2O00339 956 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 HGSO14964 777 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 GPR39O43194 453 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 HNRNPRO43390 633 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 DNAJB5O75953 348 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 C8GP07360 202 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 HOXC4P09017 264 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 PNLIPP16233 465 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 MSH3P20585 1137 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 MAP4P27816 1152 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 CSTF2P33240 577 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 TRIM23P36406 574 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 GMPRP36959 345 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 KCNC1P48547 511 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 ARFIP2P53365 341 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 NAGLUP54802 743 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 MAZP56270 477 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 ACOX1Q15067 660 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 IRF4Q15306 451 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 PCBP2Q15366 365 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 OR4D1Q15615 310 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 INPP5JQ15735 1006 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 TBCCQ15814 346 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 NKAIN2Q5VXU1 208 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 OGFOD3Q6PK18 319 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 RFLNAQ6ZTI6 216 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 MYO1HQ8N1T3 1032 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 TP53I13Q8NBR0 393 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 FBXO15Q8NCQ5 510 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 AGBL5Q8NDL9 886 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 EEF1AKMT1Q8WVE0 214 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 ASZ1Q8WWH4 475 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 POM121Q96HA1 1249 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 TMEM237Q96Q45 408 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 TUBB6Q9BUF5 446 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 ASPSCR1Q9BZE9 553 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 MYLK2Q9H1R3 596 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 TRIM39Q9HCM9 518 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 SAR1AQ9NR31 198 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 KLQ9UEF7 1012 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 OARD1Q9Y530 152 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 CROCCQ5TZA2 2017 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 CRYBG3Q68DQ2 2970 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 MED13LQ71F56 2210 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 CELSR2Q9HCU4 2923 aa10.15□□□□□ -0.78
PDLIM5-217ENST00000512274 ARHGEF17Q96PE2 2063 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 A0A1B0GTL3 188 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 GFYI3L273 518 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 BTN3A1O00481 513 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 TOR1BO14657 336 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 CHUKO15111 745 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 SLC22A2O15244 555 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 HDAC3O15379 428 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 ITM2AO43736 263 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 NUDT21O43809 227 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 HNRNPCL1O60812 293 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 ATP5HO75947 161 aa10.14□□□□□ -0.79
PDLIM5-217ENST00000512274 TM7SF2O76062 418 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms