RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CLIC3O95833 236 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 FUCA1P04066 466 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 JUNDP17535 347 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 CHRM3P20309 590 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ELK4P28324 431 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 CD40LGP29965 261 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 CD70P32970 193 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 HALP42357 657 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 PTGER3P43115 390 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 DMC1Q14565 340 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 TSNQ15631 228 aaKnown RBP12.5□□□□□ -0.41
HMGB2-205ENST00000511316 NDUFA5Q16718 116 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 PTPRNQ16849 979 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 AGAP7PQ5VUJ5 663 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ZNF691Q5VV52 312 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 CERS6Q6ZMG9 384 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 IPCEF1Q8WWN9 437 aaPredicted RBP12.5□□□□□ -0.41
HMGB2-205ENST00000511316 SORCS1Q8WY21 1168 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 FKBP10Q96AY3 582 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ALG14Q96F25 216 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 MYO19Q96H55 970 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 KCNA7Q96RP8 456 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ACTR8Q9H981 624 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 CPNE5Q9HCH3 593 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 AKIP1Q9NQ31 210 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 INTS7Q9NVH2 962 aaKnown RBP12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ELOVL2Q9NXB9 296 aa12.5□□□□□ -0.41
HMGB2-205ENST00000511316 GPC6Q9Y625 555 aaPredicted RBP12.5□□□□□ -0.41
HMGB2-205ENST00000511316 ZFC3H1O60293 1989 aaKnown RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 LOC100130705A0A1B0GUX0 176 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 H7C0S8 307 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 SLC1A7O00341 560 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 E2F3O00716 465 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ATG13O75143 517 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 CD247P20963 164 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 LPOP22079 712 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ETFBP38117 255 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 RXRGP48443 463 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ST13P50502 369 aaKnown RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 CYP4F3Q08477 520 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 KIAA1211LQ6NV74 962 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 CYP2U1Q7Z449 544 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 LGI2Q8N0V4 545 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ARL10Q8N8L6 244 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 SUMF1Q8NBK3 374 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 METTL6Q8TCB7 284 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ATOH1Q92858 354 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 FAM162AQ96A26 154 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 REXO5Q96IC2 774 aaKnown RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 MAGEB10Q96LZ2 347 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 GABRG3Q99928 467 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 CEP44Q9C0F1 390 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 SP140LQ9H930 580 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 ABCB8Q9NUT2 735 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 TRNAU1APQ9NX07 287 aaKnown RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 GMPR2Q9P2T1 348 aaKnown RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 THAP10Q9P2Z0 257 aaPredicted RBP12.49□□□□□ -0.41
HMGB2-205ENST00000511316 OR51B4Q9Y5P0 310 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 OTOGLQ3ZCN5 2332 aa12.49□□□□□ -0.41
HMGB2-205ENST00000511316 H0Y626 953 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 CNTN5O94779 1100 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 TRIM16O95361 564 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 KLF8O95600 359 aaPredicted RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 RPL10P27635 214 aaKnown RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 RGS4P49798 205 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 MAXP61244 160 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 LMAN2Q12907 356 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ABRQ12979 859 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 NR6A1Q15406 480 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 MAPKAPK3Q16644 382 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ALFQ53S48 1182 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 CDKL4Q5MAI5 379 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 CXorf57Q6NSI4 855 aaKnown RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 PRR23CQ6ZRP0 262 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 GLT6D1Q7Z4J2 308 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 LDB1Q86U70 411 aaPredicted RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 CIR1Q86X95 450 aaPredicted RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 FAM110BQ8TC76 370 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 NSMCE3Q96MG7 304 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ZNF583Q96ND8 569 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ALPK1Q96QP1 1244 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 PSKH2Q96QS6 385 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 GPR21Q99679 349 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 FAM126AQ9BYI3 521 aaPredicted RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 SLC29A3Q9BZD2 475 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 PARVBQ9HBI1 364 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ZSCAN32Q9NX65 697 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 SAMD4AQ9UPU9 718 aaKnown RBP12.48□□□□□ -0.41
HMGB2-205ENST00000511316 TIMM22Q9Y584 194 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 PCDHGA8Q9Y5G5 932 aa12.48□□□□□ -0.41
HMGB2-205ENST00000511316 PTGDR2Q9Y5Y4 395 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms