RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FSHRP23945 695 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 IVDP26440 423 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 DNASE1L1P49184 302 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 KHKP50053 298 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CEBPGP53567 150 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TAF1AQ15573 450 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 UGT8Q16880 541 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF678Q5SXM1 525 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 NCBP2-AS2Q69YL0 99 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TATDN1Q6P1N9 297 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 FAM151BQ6UXP7 276 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 GALNT7Q86SF2 657 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TRAPPC5Q8IUR0 188 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 IGDCC3Q8IVU1 814 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ARMC10Q8N2F6 343 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PAPD5Q8NDF8 572 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF248Q8NDW4 579 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 RHOXF1Q8NHV9 184 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 WDR48Q8TAF3 677 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TM9SF2Q99805 663 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 AIF1LQ9BQI0 150 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 MIR1-1HGQ9H1L0 117 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 DEFB129Q9H1M3 183 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 EXO5Q9H790 373 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CACNA1FO60840 1977 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 GLYATL1P3A0A0U1RQE8 302 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ABHD14A-ACY1A0A1B0GW23 586 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 A0A1W2PRQ8 180 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TRAPPC13A5PLN9 417 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ERAL1O75616 437 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ATE1O95260 518 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 AHSGP02765 367 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ITPKAP23677 461 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CCR4P51679 360 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PRKCDQ05655 676 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF33AQ06730 810 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CHIT1Q13231 466 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PLD1Q13393 1074 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF630Q2M218 657 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PAN2Q504Q3 1202 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC39A12Q504Y0 691 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 EIPR1Q53HC9 387 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CES5AQ6NT32 575 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 NETO2Q8NC67 525 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CHST4Q8NCG5 386 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TBC1D15Q8TC07 691 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZFP90Q8TF47 636 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 FATE1Q969F0 183 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 BTN2A3PQ96KV6 586 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TMED9Q9BVK6 235 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TTLL2Q9BWV7 592 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 GBA2Q9HCG7 927 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 SPG21Q9NZD8 308 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 FNIP2Q9P278 1114 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 RIMS3Q9UJD0 308 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TLR6Q9Y2C9 796 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PADI2Q9Y2J8 665 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PROM1O43490 865 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 KCNQ2O43526 872 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ECI2O75521 394 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PET100P0DJ07 73 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CASP3P42574 277 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CDKN2CP42773 168 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ETV4P43268 484 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CRISP3P54108 245 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 RPP38P78345 283 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CDKL1Q00532 357 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 PIGFQ07326 219 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 MFSD10Q14728 455 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 SIX1Q15475 284 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 FAM189A2Q15884 450 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 EIF2S3LQ2VIR3 472 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC36A3Q495N2 470 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CELF3Q5SZQ8 465 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 FKBP1CQ5VVH2 108 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 C9orf57Q5W0N0 161 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 APOBEC3HQ6NTF7 200 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 CDHR3Q6ZTQ4 885 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 LDB1Q86U70 411 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 MON1AQ86VX9 555 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 AQP11Q8NBQ7 271 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 OR8K5Q8NH50 307 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 TRAPPC12Q8WVT3 735 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 COQ10AQ96MF6 247 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 MCMBPQ9BTE3 642 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF436Q9C0F3 470 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 DERL2Q9GZP9 239 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ARL6Q9H0F7 186 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ABCG5Q9H222 651 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 FBXW11Q9UKB1 542 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 BCL9LQ86UU0 1499 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 SULT1B1O43704 296 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ICMTO60725 284 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 NUDT14O95848 222 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 SPAM1P38567 509 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF132P52740 706 aa7.13□□□□□ -1.27
UBE2D3-224ENST00000508474 GRSF1Q12849 480 aaKnown RBP eCLIP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms