RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 ZIC1Q15915 447 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 FCRL6Q6DN72 434 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 FIGLAQ6QHK4 219 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 DGLUCYQ7Z3D6 616 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 C17orf64Q86WR6 236 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 KMT5CQ86Y97 462 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 MARCH9Q86YJ5 346 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 C19orf47Q8N9M1 422 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 ARMC2Q8NEN0 867 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 GRAMD1AQ96CP6 724 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 PKNOX2Q96KN3 472 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 ATP6V1G3Q96LB4 118 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 DPH7Q9BTV6 452 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 DNAJC11Q9NVH1 559 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 CUEDC1Q9NWM3 386 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 OPTCQ9UBM4 332 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 BTRCQ9Y297 605 aa12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 TNPO3Q9Y5L0 923 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-221ENST00000507845 K7EPI3 171 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CDH1P12830 882 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CPA3P15088 417 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 NELFEP18615 380 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 EPORP19235 508 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 ETV4P43268 484 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 PRKAA2P54646 552 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 HSD11B2P80365 405 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CDC16Q13042 620 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 MPP2Q14168 576 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 PDK4Q16654 411 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 ZNF425Q6IV72 752 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 METTL2BQ6P1Q9 378 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 PAQR7Q86WK9 346 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 SLC22A9Q8IVM8 553 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 D2HGDHQ8N465 521 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 GOLGA6L1Q8N7Z2 621 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 AGBL5Q8NDL9 886 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 ZUFSPQ96AP4 578 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 C1QTNF3Q9BXJ4 246 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CHRNA10Q9GZZ6 450 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 KCNK9Q9NPC2 374 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 SOHLH2Q9NX45 425 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 SIDT1Q9NXL6 827 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 ANKMY1Q9P2S6 941 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 COPG2Q9UBF2 871 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 MID2Q9UJV3 735 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 DYRK1BQ9Y463 629 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 KCNE2Q9Y6J6 123 aa12.94□□□□□ -0.34
UBE2D3-221ENST00000507845 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 A0A1W2PNU3 283 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 OR2A25A4D2G3 310 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 AGRPO00253 132 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 E2F3O00716 465 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 TM9SF1O15321 606 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 MAP3K7O43318 606 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 ATP8B1O43520 1251 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 NRP2O60462 931 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 RPS17P08708 135 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 CSTF2P33240 577 aaKnown RBP eCLIP12.93□□□□□ -0.343e-8■■■■□ 24.2
UBE2D3-221ENST00000507845 ARL4DP49703 201 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 HERVK_113P63132 956 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 FOXC1Q12948 553 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 KCNAB1Q14722 419 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 NAA25Q14CX7 972 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 PCLAFQ15004 111 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 TEX9Q8N6V9 391 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 ABHD11Q8NFV4 315 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 SLC5A11Q8WWX8 675 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 CCDC126Q96EE4 140 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 L3HYPDHQ96EM0 354 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 TCTN2Q96GX1 697 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 TMEM237Q96Q45 408 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 PLCD4Q9BRC7 762 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 ERVK-6Q9BXR3 956 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 FAM60AQ9NP50 221 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 PDE7BQ9NP56 450 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 TMEM184CQ9NVA4 438 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 OXSMQ9NWU1 459 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 GPRC5BQ9NZH0 403 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 PCTPQ9UKL6 214 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 SNX7Q9UNH6 387 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 WASF3Q9UPY6 502 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
UBE2D3-221ENST00000507845 TMEM120BA0PK00 339 aa12.92□□□□□ -0.34
UBE2D3-221ENST00000507845 PMS2P1A4D2B8 440 aa12.92□□□□□ -0.34
UBE2D3-221ENST00000507845 EFCAB7A8K855 629 aa12.92□□□□□ -0.34
UBE2D3-221ENST00000507845 E7EQ34 232 aa12.92□□□□□ -0.34
UBE2D3-221ENST00000507845 H7BY64 318 aa12.92□□□□□ -0.34
UBE2D3-221ENST00000507845 PRAMEF4O60810 478 aa12.92□□□□□ -0.34
UBE2D3-221ENST00000507845 CTSVO60911 334 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms