RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 COLEC12Q5KU26 742 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 DCAF10Q5QP82 559 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 WASHC2DQ5SRD0 308 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ICE2Q659A1 982 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 STEAP4Q687X5 459 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 HIBCHQ6NVY1 386 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 PAQR7Q86WK9 346 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 HPS6Q86YV9 775 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 RP1L1Q8IWN7 2480 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 CPNE9Q8IYJ1 553 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 TTC29Q8NA56 475 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 MIB2Q96AX9 1013 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 CAPZA3Q96KX2 299 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 C10orf90Q96M02 699 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 SMAD5Q99717 465 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 NAPGQ99747 312 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 MRPS30Q9NP92 439 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 P4HTMQ9NXG6 502 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 TAC3Q9UHF0 121 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF451Q9Y4E5 1061 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 SAR1BQ9Y6B6 198 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 TEX264Q9Y6I9 313 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 MDC1Q14676 2089 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 IGLV3-12A0A075B6K2 115 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 HYKKA2RU49 373 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CLEC18AA5D8T8 446 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 H0YGG7 62 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CCDC188H7C350 402 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 AGPSO00116 658 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ZBTB14O43829 449 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 SEC31AO94979 1220 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CCNDBP1O95273 360 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 TSPAN12O95859 305 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 AHSGP02765 367 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PIM1P11309 404 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 MMP11P24347 488 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 RPA3P35244 121 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ELK3P41970 407 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CDKN2DP55273 166 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ARF3P61204 181 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ABATP80404 500 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 DR1Q01658 176 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 FRG1Q14331 258 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 IGFBP7Q16270 282 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 RBM20Q5T481 1227 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 VWA5B1Q5TIE3 1220 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 LRRC8EQ6NSJ5 796 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 UGT3A1Q6NUS8 523 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PRMT9Q6P2P2 845 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CLEC18BQ6UXF7 455 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 UBE2R2Q712K3 238 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PIWIL4Q7Z3Z4 852 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 KLHL7Q8IXQ5 586 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PDIK1LQ8N165 341 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF454Q8N9F8 522 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CLEC18CQ8NCF0 446 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PPFIBP2Q8ND30 876 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 EEF1AKMT1Q8WVE0 214 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 LRRC39Q96DD0 335 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CERS2Q96G23 380 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 FER1L6-AS2Q96M78 137 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PWWP2AQ96N64 755 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 RUNDC3BQ96NL0 473 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 OR2A5Q96R48 311 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 NDNQ99608 321 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 TRIM51Q9BSJ1 452 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 GPR83Q9NYM4 423 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 TAS2R13Q9NYV9 303 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 C5AR2Q9P296 337 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 CTSFQ9UBX1 484 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ZC3H7BQ9UGR2 993 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 TRMT6Q9UJA5 497 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 NXT1Q9UKK6 140 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 ADAMTS6Q9UKP5 1117 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 PDE10AQ9Y233 779 aa8.66□□□□□ -1.02
PDLIM5-209ENST00000506632 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 SHANK1Q9Y566 2161 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 A6NL46 340 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 E7ESA3 106 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 PEX12O00623 359 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 SOCS6O14544 535 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC16A5O15375 505 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 TTI1O43156 1089 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 DPM1O60762 260 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 C8GP07360 202 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 EZRP15311 586 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 OR1D4P47884 311 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 CARSP49589 748 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 ITGA8P53708 1063 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 MLLT10P55197 1068 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 SP140Q13342 867 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 MYBPC3Q14896 1274 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 MUM1Q2TAK8 710 aa8.65□□□□□ -1.02
PDLIM5-209ENST00000506632 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms