RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SLBPQ14493 270 aaKnown RBP eCLIP11.78□□□□□ -0.52
LIN54-206ENST00000506560 CYP51A1Q16850 503 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CSGALNACT1Q8TDX6 532 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 ATL1Q8WXF7 558 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 TFGQ92734 400 aaPredicted RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 PPWD1Q96BP3 646 aaKnown RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 RIPOR3Q96MK2 946 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 ZBTB18Q99592 522 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 COQ10BQ9H8M1 238 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CARS2Q9HA77 564 aaKnown RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 SPATA6Q9NWH7 488 aaPredicted RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 ASIC5Q9NY37 505 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 VPS29Q9UBQ0 182 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 BCAP29Q9UHQ4 241 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 MOSPD1Q9UJG1 213 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 DHRS12A0PJE2 317 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 C7orf72A4D263 438 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 H0Y8X5 98 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 KCNH1O95259 989 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 ASGR2P07307 311 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 HOXB2P14652 356 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 PTPN6P29350 595 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 NTSR1P30989 418 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 IGFALSP35858 605 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CLCNKAP51800 687 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CLDN2P57739 230 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 UGT8Q16880 541 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 THEMIS2Q5TEJ8 643 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CAPN13Q6MZZ7 669 aaPredicted RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 RIMKLAQ8IXN7 391 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 TDHQ8IZJ6 230 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CLEC4FQ8N1N0 589 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 CHCHD4Q8N4Q1 142 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 SMRP1Q8NCR6 262 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 SEPHS2Q99611 448 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 THUMPD3Q9BV44 507 aaKnown RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 PAIP1Q9H074 479 aaKnown RBP11.78□□□□□ -0.52
LIN54-206ENST00000506560 OR51B5Q9H339 312 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 WDR26Q9H7D7 661 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 KCNE2Q9Y6J6 123 aa11.78□□□□□ -0.52
LIN54-206ENST00000506560 COL6A3P12111 3177 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 C17orf113A0A1B0GUU1 675 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 SAC3D1A6NKF1 404 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 ENO4A6NNW6 628 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 H0YIV9 168 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 PDLIM1O00151 329 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 ADH1BP00325 375 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TGFB1P01137 390 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 CDH1P12830 882 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 ZNF26P17031 533 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 PNLIPRP1P54315 467 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 ADPRHP54922 357 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 FOLH1Q04609 750 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBCELQ5QJ74 424 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 C6orf52Q5T4I8 152 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 PDZD3Q86UT5 571 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 CLECL1Q8IZS7 167 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 GATA6Q92908 595 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 C11orf24Q96F05 449 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 SORBS1Q9BX66 1292 aaKnown RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 UTS2RQ9UKP6 389 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 PIAS3Q9Y6X2 628 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 SDK1Q7Z5N4 2213 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 MYOCOSA0A1B0GUC4 107 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 C2CD4DB7Z1M9 353 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 AP1G1O43747 822 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 UQCRBP14927 111 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 PRPH2P23942 346 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TRIM23P36406 574 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 KLC1Q07866 573 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 HKDC1Q2TB90 917 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TPRG1LQ5T0D9 272 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 GCNT7Q6ZNI0 430 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 SYT12Q8IV01 421 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 OR10Q1Q8NGQ4 319 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 ZUFSPQ96AP4 578 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 ZNF514Q96K75 400 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 REXO4Q9GZR2 422 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms