RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TRIM39Q9HCM9 518 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 PLSCR3Q9NRY6 295 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 ABCC13Q9NSE7 274 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 NLE1Q9NVX2 485 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 C14orf119Q9NWQ9 140 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 ERVK13-1Q9NX77 482 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 B3GNT2Q9NY97 397 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 CNOT2Q9NZN8 540 aaKnown RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 ENOPH1Q9UHY7 261 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 AGO1Q9UL18 857 aaKnown RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 ABCG2Q9UNQ0 655 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 MED16Q9Y2X0 877 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 NT5C1B-RDH14C9J2C7 533 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 E9PAM4 449 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 SSX4O60224 188 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 NOS1APO75052 506 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 CPN2P22792 545 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 C21orf33P30042 268 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 CLCN4P51793 760 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 RAB25P57735 213 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 ARHGAP1Q07960 439 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 EIF3MQ7L2H7 374 aaKnown RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 HDDC2Q7Z4H3 204 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 TRIM46Q7Z4K8 759 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 GRAMD2AQ8IUY3 354 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 CPA6Q8N4T0 437 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 C1orf52Q8N6N3 182 aaKnown RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 OR52B6Q8NGF0 335 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 OR5H6Q8NGV6 325 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 ARRDC2Q8TBH0 407 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 RAET1EQ8TD07 263 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 SLC39A13Q96H72 371 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 CDKN2AIPNLQ96HQ2 116 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 Q96MT0 163 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 GPR21Q99679 349 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 KATNAL1Q9BW62 490 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 THUMPD1Q9NXG2 353 aaKnown RBP15.45■□□□□ 0.06
SCLT1-208ENST00000506368 AASSQ9UDR5 926 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 FAM50BQ9Y247 325 aa15.45■□□□□ 0.06
SCLT1-208ENST00000506368 SH3D21A4FU49 640 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 C1QBP02746 253 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 PKMP14618 531 aaKnown RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GRK5P34947 590 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 PBX3P40426 434 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GZMKP49863 264 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 HTR6P50406 440 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 PURAQ00577 322 aaKnown RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 TSPY1Q01534 308 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 TAGLNQ01995 201 aaKnown RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 DSC2Q02487 901 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 RUNX1T1Q06455 604 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 TWF2Q6IBS0 349 aaKnown RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 ZNF605Q86T29 641 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 FBXO16Q8IX29 292 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 SDR16C5Q8N3Y7 309 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GDPD1Q8N9F7 314 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 OR4F6Q8NGB9 312 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 PPTC7Q8NI37 304 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 COPS5Q92905 334 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 EMID1Q96A84 441 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 SPATA9Q9BWV2 254 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GTPBP2Q9BX10 602 aaKnown RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 SRRQ9GZT4 340 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 DNMT3LQ9UJW3 386 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 STOML2Q9UJZ1 356 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 KLHL20Q9Y2M5 609 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GPSM3Q9Y4H4 160 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 PCDHGB3Q9Y5G1 929 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 V9GYH0 126 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 IQCMA0A1B0GVH7 501 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 A0A1W2PQ67 120 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 A0A1W2PQ72 361 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 NCF1BA6NI72 391 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 NCF1CA8MVU1 366 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 CCL22O00626 93 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 MPZL2O60487 215 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 ZNF682O95780 498 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 TSPAN12O95859 305 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 RHOQP17081 205 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 HOXB9P17482 250 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 MYL9P24844 172 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 HOXD10P28358 340 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 PCSK1P29120 753 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 FMO4P31512 558 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 SLC19A1P41440 591 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 RORCP51449 518 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 SLAMF1Q13291 335 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GTF2H2Q13888 395 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GNASQ5JWF2 1037 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GTF2H2CQ6P1K8 395 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 CBLL1Q75N03 491 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 GOLGA7Q7Z5G4 137 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 EFHBQ8N7U6 833 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 ASB15Q8WXK1 588 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 KCNJ9Q92806 393 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 NEDD4LQ96PU5 975 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 BARD1Q99728 777 aaKnown RBP15.44■□□□□ 0.06
SCLT1-208ENST00000506368 HTATIP2Q9BUP3 242 aa15.44■□□□□ 0.06
SCLT1-208ENST00000506368 ROGDIQ9GZN7 287 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms