RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 LHX9Q9NQ69 397 aa8.66□□□□□ -1.02
PTPN20-215ENST00000505814 C20orf96Q9NUD7 363 aaPredicted RBP8.66□□□□□ -1.02
PTPN20-215ENST00000505814 WHRNQ9P202 907 aa8.66□□□□□ -1.02
PTPN20-215ENST00000505814 SLC17A6Q9P2U8 582 aa8.66□□□□□ -1.02
PTPN20-215ENST00000505814 MRFAP1Q9Y605 127 aa8.66□□□□□ -1.02
PTPN20-215ENST00000505814 GSAPA4D1B5 854 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 ZNF891A8MT65 544 aaPredicted RBP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 PFDN6O15212 129 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 EIF3HO15372 352 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 KDM1AO60341 852 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 SCRG1O75711 98 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 RAB40ALP0C0E4 278 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 ERVK-10P10266 1014 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 MAGP20916 626 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 FDXRP22570 491 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 PAFAH1B1P43034 410 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 CSRP3P50461 194 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 CSE1LP55060 971 aaKnown RBP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 CDKN2DP55273 166 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 GUCY2DQ02846 1103 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 RELAQ04206 551 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 FOXM1Q08050 763 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 CDC20Q12834 499 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 DNASE1L3Q13609 305 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 THOC5Q13769 683 aaKnown RBP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 TBR1Q16650 682 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 PPP1R3AQ16821 1122 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 ZXDCQ2QGD7 858 aaPredicted RBP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 KLHL38Q2WGJ6 581 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 RBM20Q5T481 1227 aaKnown RBP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 ZNF425Q6IV72 752 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 RHBDD2Q6NTF9 364 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 SYT10Q6XYQ8 523 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 Q6ZS46 218 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 OR2L3Q8NG85 312 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 ZNF480Q8WV37 535 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 STARD8Q92502 1023 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 SLC22A18Q96BI1 424 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 PDLIM5Q96HC4 596 aaKnown RBP8.65□□□□□ -1.02
PTPN20-215ENST00000505814 GBP5Q96PP8 586 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 RUFY1Q96T51 708 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 GPR21Q99679 349 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 EFHD1Q9BUP0 239 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 SMYD2Q9NRG4 433 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 ZDHHC18Q9NUE0 388 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 TUBD1Q9UJT1 453 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 CROTQ9UKG9 612 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 CHMP2BQ9UQN3 213 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 PSAT1Q9Y617 370 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 MAD1L1Q9Y6D9 718 aa8.65□□□□□ -1.02
PTPN20-215ENST00000505814 FLNCQ14315 2725 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 EFCAB8A8MWE9 144 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 TARM1B6A8C7 271 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 E7ENX8 843 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 NDC80O14777 642 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 NRP2O60462 931 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 CTSVO60911 334 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 CNOT3O75175 753 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 PSMB5P28074 263 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 IMPA1P29218 277 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 GRIA3P42263 894 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ITGA1P56199 1179 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ARL4CP56559 192 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 YBX1P67809 324 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 TAP2Q03519 686 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 C2orf54Q08AI8 447 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 SP140Q13342 867 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 FASTKQ14296 549 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 KRT33BQ14525 404 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 TTLL9Q3SXZ7 439 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 BBS9Q3SYG4 887 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 TMTC4Q5T4D3 741 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 PRAMEF17Q5VTA0 474 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 LCN10Q6JVE6 187 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 LRRC8EQ6NSJ5 796 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ARMC6Q6NXE6 501 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 PIWIL4Q7Z3Z4 852 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 SLC26A11Q86WA9 606 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 CPNE9Q8IYJ1 553 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ZNF843Q8N446 348 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 GALNT11Q8NCW6 608 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 FBXO36Q8NEA4 188 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 OR9A1PQ8NGU1 263 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 INPP5DQ92835 1189 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 CATSPER2Q96P56 530 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 OLFM1Q99784 485 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 DPH2Q9BQC3 489 aaPredicted RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 GPR87Q9BY21 358 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 RASSF4Q9H2L5 321 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 GPN2Q9H9Y4 310 aaPredicted RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 SLC6A20Q9NP91 592 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 SLC22A11Q9NSA0 550 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 IARS2Q9NSE4 1012 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 STARD5Q9NSY2 213 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 SOHLH2Q9NX45 425 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ANKMY1Q9P2S6 941 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 ZC3H7BQ9UGR2 993 aaKnown RBP8.64□□□□□ -1.03
PTPN20-215ENST00000505814 LNPEPQ9UIQ6 1025 aa8.64□□□□□ -1.03
PTPN20-215ENST00000505814 CDC23Q9UJX2 597 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms